# Molecular mechanisms underlying human circadian sleep disorders

> **NIH NIH R01** · FLORIDA STATE UNIVERSITY · 2020 · $303,199

## Abstract

Project Summary/Abstract
 Adverse consequences from having a faulty circadian clock include compromised sleep quality, poor
performance, and increased risk for accidents in the short-term, and metabolic diseases and cancer in the
long-term. However, our understanding of circadian sleep disorders—and thus our ability to develop treatments
for them—is limited by the incompleteness of our molecular models and our dearth of animal models. For
example, many patients with circadian sleep disorders have wake-sleep cycles that shift daily in an
unpredictable manner. Yet there were no animal models that emulated such unstable rhythms until our
laboratory developed one in the last two years. There may be other human circadian disorders that go
unrecognized or are poorly understood because our limited set of animal models fall far short of matching the
diversity of the human gene pool. We propose to study a highly diverse set of mutations and single-nucleotide
polymorphisms (SNPs) to elucidate their effect on circadian clock function. We would thus enhance the
understanding of diverse chronotypes and sleep disorders in humans and pave the way for developing
effective treatments.
 Specific Aim 1: Identify genetic variations in PER that may be associated with human circadian
sleep disorders. Because it would be prohibitively expensive to use animal models to recapitulate all known
SNPs and mutations in human clock genes, we will first characterize a large number of important variants in
cell culture, using U2OS and MEFs, cell lines widely accepted as models for circadian rhythms. Our focus will
be on SNPs or mutations in Period (Per) genes because Per1 and 2 are the most important mammalian genes
in determining the clock’s period and phase, and hundreds of variants of each gene are known to exist. We will
use the CRISPR/Cas9 technology to reproduce diverse variants in clock cells, and we will evaluate their
circadian phenotypes. We have already identified a Per1 deletion mutant revealing a novel motif critical for
phosphorylation, leading us to a novel hypothesis for how PER phosphorylation is dynamically regulated. We
will test this hypothesis and continue to study other mechanisms of posttranslational regulation critical for the
clock. We will also reproduce a select set of variants in mice for in vivo testing.
 Specific Aim 2: Identify key regulators of robust and timed proteasomal degradation of PER. Our
previous and ongoing studies suggest that the circadian clock is dependent on rhythms of the core clock
protein PER, and its proteasomal degradation is regulated by both ubiquitination and deubiquitination. We
propose to conduct a systematic search for E3 ligases that regulate PER ubiquitination and degradation, and
to test their function in cell models, along with the functions of candidate deubiquitnases. In Aim 1, we will
identify key regulatory sites within PER, while in Aim 2, we will identify key enzymes involved in that regulation.

## Key facts

- **NIH application ID:** 10006843
- **Project number:** 5R01GM131283-02
- **Recipient organization:** FLORIDA STATE UNIVERSITY
- **Principal Investigator:** CHOOGON LEE
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $303,199
- **Award type:** 5
- **Project period:** 2019-09-04 → 2023-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10006843

## Citation

> US National Institutes of Health, RePORTER application 10006843, Molecular mechanisms underlying human circadian sleep disorders (5R01GM131283-02). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10006843. Licensed CC0.

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