# SCH: A Computer Vision and Lens-Free Imaging System for Automatic Monitoring of Infections

> **NIH NIH R01** · JOHNS HOPKINS UNIVERSITY · 2020 · $291,252

## Abstract

Automated monitoring and screening of various physiological signals is an indispensable tool in modern medicine. However, despite the
 preponderance of long-term monitoring and screening modalities for certain vital signals, there are a significant number of applications for
 which no automated monitoring or screening is available. For example, patients in need of urinary catheterization are at significant risk of
 urinary tract infections, but long-term monitoring for a developing infection while a urinary catheter is in place typically requires a caregiver to
 frequently collect urine samples which then must be transported to a laboratory facility to be tested for a developing infection. Disruptive
 technologies at the intersection of lens-free imaging, fluidics, image processing, computer vision and machine learning offer a tremendous
 opportunity to develop new devices that can be connected to a urinary catheter to automatically monitor urinary tract infections. However, novel
 image reconstruction, object detection and classification, and deep learning algorithms are needed to deal with challenges such as low image
 resolution, limited labeled data, and heterogeneity of the abnormalities to be detected in urine samples.
This project brings together a multidisciplinary team of computer scientists, engineers and clinicians to design, develop and test a system that
integrates lens-free imaging, fluidics, image processing, computer vision and machine learning to automatically monitor urinary tract infections.
The system will take a urine sample as an input, image the sample with a lens-free microscope as it flows through a fluidic channel, reconstruct
the images using advanced holographic reconstruction algorithms, and detect and classify abnormalities, e.g., white blood cells, using
advanced computer vision and machine learning algorithms. Specifically, this project will: (1) design fluidic and optical hardware to
appropriately sample urine from patient lines, flow the sample through the lens-free imager, and capture holograms of the sample; (2) develop
holographic image reconstruction algorithms based on deep network architectures constrained by the physics of light diffraction to produce high
quality images of the specimen from the lens-free holograms; (3) develop deep learning algorithms requiring a minimal level of manual
supervision to detect various abnormalities in the fluid sample that might be indicative of a developing infection (e.g., the presence of white
bloods cells or bacteria); and (4) integrate the above hardware and software developments into a system to be validated on urine samples
obtained from patient discards against standard urine monitoring and screening methods.
RELEVANCE (See instructions):
 This project could lead to the development of a low-cost device for automated screening and monitoring of urinary tract infections (the most
 common hospital and nursing home acquired infection), and such a device could eliminate ...

## Key facts

- **NIH application ID:** 10019459
- **Project number:** 5R01AG067396-02
- **Recipient organization:** JOHNS HOPKINS UNIVERSITY
- **Principal Investigator:** Benjamin D Haeffele
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $291,252
- **Award type:** 5
- **Project period:** 2019-09-30 → 2023-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10019459

## Citation

> US National Institutes of Health, RePORTER application 10019459, SCH: A Computer Vision and Lens-Free Imaging System for Automatic Monitoring of Infections (5R01AG067396-02). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10019459. Licensed CC0.

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