Novel genetic dependencies in VRK2 methylated glioblastoma multiforme

NIH RePORTER · NIH · R03 · $178,000 · view on reporter.nih.gov ↗

Abstract

Abstract Glioblastoma multiforme (GBM) affects 10,000 Americans each year and is one of the most common and deadly brain cancers, with a median overall survival of 12-14 months from diagnosis. Treatment consists of a surgical resection, followed by chemo-radiation and further rounds of chemotherapy. In particular, patients whose tumors harbor MGMT methylation exhibit better responses to temozolomide (TMZ). Despite advances in care, few patients survive more than 5 years, and new treatments are desperately needed. We have created and interrogated the Cancer Dependency Map (www.depmap.org) and have discovered that a subset of GBM cell lines require VRK1 for proliferation and survival. Cancer cell lines that depend on VRK1 exhibit methylation and down-regulation of VRK2, a kinase involved in the DNA damage response and mitotic chromosome segregation. In the TCGA GBM cohort, approximately 15% of patients show decreased expression of VRK2. We propose to confirm VRK1 dependency in cancer cell lines and patient-derived GBM organoids with VRK2 methylation, and will determine whether VRK1 loss leads to defects in chromosome segregation and DNA damage response. In parallel, we will use a global phospho-proteomic approach to discover other druggable, signaling pathways affected by VRK2 methylation. Taken together, these studies will credential VRK1 as a target in GBM that exhibit VRK2 methylation and form the foundation for drug development efforts focused on the VRK family of kinases.

Key facts

NIH application ID
10046375
Project number
1R03TR003343-01
Recipient
DANA-FARBER CANCER INST
Principal Investigator
William C. Hahn
Activity code
R03
Funding institute
NIH
Fiscal year
2020
Award amount
$178,000
Award type
1
Project period
2020-09-01 → 2021-08-31