Scalable Bayesian methods for big imaging data analysis

NIH RePORTER · NIH · R01 · $329,988 · view on reporter.nih.gov ↗

Abstract

ABSTRACT! This proposal will address the most timely and important issues in statistical analysis of big imaging data. Our project is motivated by "The Adolescent Brain Cognitive Development (ABCD) Study”, which is the largest long-term study of brain development and child health in the United States and is funded by the National Institutes of Health (NIH). Innovative aspects of this proposal are: 1) We develop a new Bayesian image-on- vector regression model with novel sparse and smooth Gaussian process priors. It enables to perform association analysis between high-resolution images of brain activity and high-dimensional vectors of social environmental factors and clinical variables. To the best of our knowledge no existing methods can efficiently and jointly analyze high-resolution images and high-dimensional vectors of covariates simultaneously under a systematic modeling framework; 2) We develop a new Bayesian scalar-on-image neural network model with sparse, smooth, and spatially-varying coefficients. This new model has great potential to make better predictions about the risk of an adolescent initiating substance use compared to all existing methods; and more importantly, it will identify important imaging biomarkers that are associated with substance use patterns. This will provide a better understanding of the pathology of substance use initiation; 3) We propose a Bayesian model for high-dimensional mediation analysis of multimodality imaging data by combining image-on-vector regression and scalar-on-image regression with modifications. Under the potential outcome framework, ! we will define the direct effects of environmental factors/electronic health records on psychopathology, as well as their indirect effects that are mediated through the changes in brain functions and/or structures. 4) We develop scalable posterior computation algorithms for all of the proposed models. These efficient computation tools will enable the possibility to apply the statistical methods in the clinical and translational research and applications. Our methods can address two key questions about adolescent brain cognitive development: 1) they will identify important childhood experiences and social environmental factors, such as sports, video games, social media, unhealthy sleep patterns, and smoking, that affect brain development; 2) understand the inferences of brain development on the risk of substance use initiation and patterns, including detailed quantity, frequency, route of administration, and co-use patterns. ! !

Key facts

NIH application ID
10049804
Project number
1R01DA048993-01A1
Recipient
UNIVERSITY OF MICHIGAN AT ANN ARBOR
Principal Investigator
Timothy D Johnson
Activity code
R01
Funding institute
NIH
Fiscal year
2020
Award amount
$329,988
Award type
1
Project period
2020-09-30 → 2025-07-31