# Enrichment of the State-1 Conformation of the HIV-1 Envelope Glycoprotein

> **NIH NIH R01** · DANA-FARBER CANCER INST · 2021 · $750,826

## Abstract

PROJECT SUMMARY/ABSTRACT
 The entry of human immunodeficiency virus (HIV-1) into host cells is mediated by the envelope glycoprotein
(Env) trimer ((gp120/gp41)3). As the only virus-specific molecule on the viral surface, Env is the major target for
host neutralizing antibodies. During virus entry, binding to the receptors triggers conformational changes in the
metastable Env that allow the fusion of viral and target cell membranes. Env conformational flexibility, which is
important for virus entry, also contributes to HIV-1's ability to evade the host antibody response. Prior to receptor
engagement, the HIV-1 Env trimer on virions can potentially sample three conformations: a metastable "closed"
conformation (State 1), the "open" CD4-bound conformation (State 3), and an intermediate "partially open"
conformation (State 2). Primary HIV-1 Envs are maintained in State 1 by multiple intramolecular and intersubunit
interactions, rendering these Envs relatively resistant to the binding of potentially neutralizing antibodies. CD4
binding drives Env from State 1 to State 2 and then into State 3, the prehairpin intermediate.
 The conformational flexibility of HIV-1 Env trimers has created challenges for structural studies and for the
design of vaccines. Stabilization of soluble gp140 (sgp140) Env trimers has been achieved by introduction of
an SOS disulfide bond linking gp120 and gp41, substitution of proline for isoleucine 559, and truncation of the
gp41 ectodomain at residue 664. Crystal and cryo-EM structures of these sgp140 SOSIP.664 trimers have been
solved. A cryo-EM structure of a cytoplasmic tail-deleted Env trimer (Env∆CT) in complex with the PGT151
neutralizing antibody was virtually identical to the sgp140 SOSIP.664 structure. Although these HIV-1 Env
trimer structures are widely believed to represent the closed State-1 conformation, recent data from single-
molecule Fluorescence Resonance Energy Transfer (smFRET) and crosslinking/mass spectrometry analyses
indicate that this assumption is incorrect. In fact, the gp120 subunits of the sgp140 SOSIP.664 trimers and the
Env∆CT/PGT151 complex are both in a State 2-like conformation! Crosslinking/mass spectrometry of the native
cell-surface Env and sgp140 SOSIP.664 trimers revealed differences in the conformation of several gp120 and
gp41 regions!
 The surprising results described above indicate that substantial differences exist between the conformations
of the native State-1 Env and the structurally well-characterized sgp140 SOSIP.664 and PGT151-bound Env∆CT
trimers, which apparently represent a default intermediate (State 2-like) conformation. Thus, we currently lack
detailed information about the structure of the State-1 HIV-1 Env trimer, the major target for neutralizing
antibodies and virus entry inhibitors. The proposed work seeks to devise approaches to express and purify HIV-
1 Env trimers enriched in a State-1 conformation. Given the importance of shape to the humoral immune system,
we wil...

## Key facts

- **NIH application ID:** 10094191
- **Project number:** 5R01AI145547-03
- **Recipient organization:** DANA-FARBER CANCER INST
- **Principal Investigator:** JOSEPH G SODROSKI
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $750,826
- **Award type:** 5
- **Project period:** 2019-01-17 → 2022-12-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10094191

## Citation

> US National Institutes of Health, RePORTER application 10094191, Enrichment of the State-1 Conformation of the HIV-1 Envelope Glycoprotein (5R01AI145547-03). Retrieved via AI Analytics 2026-06-11 from https://api.ai-analytics.org/grant/nih/10094191. Licensed CC0.

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