# Supplement: Exploring the biology of O-acetyl sialic acids using stable synthetic mimics

> **NIH NIH R01** · UNIVERSITY OF CALIFORNIA AT DAVIS · 2020 · $195,234

## Abstract

Project Summary
Exploring the biology of O-acetyl sialic acids using stable synthetic mimics
This supplement request explores the possibility that sialoglycans may be co-receptors for SARS and COVID-
19 virus spike (S) proteins, as is the case with MERS and other Coronaviruses (CoVs). Numerous viruses
recognize host cell surface glycans that terminate in sialic acids (Sias), a family of 9-carbon-backbone
monosaccharides present at very high densities on all vertebrate cell surfaces, and on most secreted proteins–
–particularly mucins that line and protect mucosal surfaces like the airways. Viral recognition of host sialoglycans
is affected by Sia type, linkage to, and the structure of underlying glycans. Much of this natural diversity of Sias
in viral infection remains underexplored. While many respiratory disease-causing viruses target Sias, Sia
recognition is not currently reported in SARS-CoV-2, the COVID-19 pandemic virus. This stands in contrast to
the extensive literature on Coronaviruses and Sia receptors and is likely because a definitive human protein
receptor (ACE2) for the virus S protein has been identified. A similar situation existed for the earlier MERS-CoV
which had a well-defined receptor (DPP4) but was later found to also bind Sias via a different binding site. Given
the very high Sia density in vivo, and the fact that Sias are the first contact of a virus on a mucosal surface, Sia
diversity is likely to play important roles during natural infections. We hypothesize that airway Sias are also
recognized by S proteins of SARS-CoV-1 and SARS-CoV-2. This supplement is based on strong foundations
built by decades of studies of Sia diversity by the collaborating labs, including the parent project which addresses
instability of Sia O-acetyl modifications by synthesizing sialosides with corresponding N-acetyl analogs. The
urgent need for more careful exploration of Sia-binding functions of SARS and MERS will utilize a unique
sialoglycan microarray built up over years of collaboration between the labs. Additional diversity of human
sialosides such as those with 9-O-lactyl Sia that have heretofore not been studied, but could be critical, will also
be explored. We propose sialoglycan microarray studies of recombinant soluble external domains of S proteins
of MERS-CoV, SARS-CoV-1 and SARS-CoV-2 in comparison with human CoVs causing milder diseases, to
detect Sia-dependent binding that has been missed so far. We will synthesize sialosides containing naturally
occurring 9-O-lactyl-Sia and more stable 9-N-lactyl analogs and integrate these with the microarray and binding
studies. Computational studies, including molecular dynamics simulation of binding free energies, will
complement the array studies by predicting Sia variants that might bind, and modelling binding seen in array
studies. These studies will generate new knowledge that may help to better understand viral infection,
pathogenesis, and transmission from animals to humans and among ...

## Key facts

- **NIH application ID:** 10135732
- **Project number:** 3R01AI130684-03S1
- **Recipient organization:** UNIVERSITY OF CALIFORNIA AT DAVIS
- **Principal Investigator:** Xi Chen
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $195,234
- **Award type:** 3
- **Project period:** 2020-05-06 → 2021-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10135732

## Citation

> US National Institutes of Health, RePORTER application 10135732, Supplement: Exploring the biology of O-acetyl sialic acids using stable synthetic mimics (3R01AI130684-03S1). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/10135732. Licensed CC0.

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