Structural Studies of the Corona Virus Life Cycle

NIH RePORTER · NIH · R00 · $129,120 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY Coronaviruses are a diverse family of viruses infecting many animals including humans. The 21st century is now experiencing its third outbreak of a novel pathogenic coronavirus that has crossed from an animal host into humans for the first time. The outbreak of SARS-CoV-2 is unprecedented among human coronaviruses in its size and the speed of its spread. Countering this viral outbreak will require a detailed mechanistic understanding of virus protein function. The goals of this project are to gain highly detailed information about the SARS-CoV-2 replication complex using single-particle cryo-electron microscopy. We will use this high-resolution imaging technique to determine structures of the SARS-CoV-2 polymerase complex bound to substrates and small molecule antiviral drugs. We will complement these structural analyses with a detailed biochemical study of protein-protein and protein-RNA interactions and the influence of these interactions on SARS-CoV-2 polymerase activity. These studies include mutagenesis of key interfaces in the protein complex and testing of the recombinant proteins in polymerase activity assays. These studies have the potential to illuminate the mechanisms used by the SARS-CoV-2 polymerase complex to replicate its viral genome and provide a mechanistic understanding of antiviral therapeutic action key to the development of novel antiviral therapeutics to treat COVID-19.

Key facts

NIH application ID
10140002
Project number
3R00AI123498-03S1
Recipient
UNIVERSITY OF WISCONSIN-MADISON
Principal Investigator
Robert N Kirchdoerfer
Activity code
R00
Funding institute
NIH
Fiscal year
2020
Award amount
$129,120
Award type
3
Project period
2020-05-21 → 2020-11-30