Automated platform for high-throughput genetic analyses in C. elegans

NIH RePORTER · NIH · R01 · $373,098 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY The roundworm C. elegans is one of the most widely studied and powerful genetic model organisms in biology. Many experiments in C. elegans genetics require time-consuming and low throughput manual procedures. For example, the forward genetic screen, through which genes influencing a phenotype are found by identification of mutants, often involves assessment of tens of thousands of individual animals. Full exploitation of C. elegans as a model system will benefit tremendously from automation. We will develop automated methods for performing genetic screens and many other tasks routinely done in C. elegans labs. The key components of the system will be a moving-camera machine vision system for monitoring individual worms on various substrates, and a robotic arm capable of transferring individual worms from one plate to another. To test and refine our methods, we will apply our automation system to perform a saturation genetic screen for modifiers of developmentally-timed sleep, which has molecular and behavioral similarities to sleep in mammals.

Key facts

NIH application ID
10161875
Project number
5R01NS115995-02
Recipient
UNIVERSITY OF PENNSYLVANIA
Principal Investigator
Christopher Fang-Yen
Activity code
R01
Funding institute
NIH
Fiscal year
2021
Award amount
$373,098
Award type
5
Project period
2020-05-15 → 2024-03-31