# Uncovering the roles of ubiquitination and the ESCRT pathway in degradative sorting of SV proteins.

> **NIH NIH R01** · COLUMBIA UNIVERSITY HEALTH SCIENCES · 2020 · $56,675

## Abstract

PROJECT SUMMARY
Synaptic vesicles (SVs) are highly specialized organelles that store and release neurotransmitters. The
accumulation of old or damaged proteins on SVs compromises neurotransmission and can lead to dysfunctional
neural circuits and networks. Indeed, recent studies have shown that mutations in genes that regulate SV protein
degradation are associated with neurological and neurodegenerative disorders, demonstrating the critical
importance of SV protein turnover for nervous system health. Yet the molecular mechanisms responsible for SV
turnover and degradation remain poorly understood. The overall goal of this project is to elucidate these
mechanisms, providing critical insights into the etiology of diseases that afflict millions of Americans. Our recent
work has shown that the ESCRT pathway mediates the activity-dependent degradation of SV membrane
proteins. The ESCRT pathway comprises a series of protein complexes that sequentially recruit ubiquitinated
cargo and catalyze the formation of multivesicular bodies (MVBs) for delivery of these cargo to lysosomes.
Intriguingly, we find that increased neuronal firing stimulates the activation of de/ubiquitinating enzymes at the
synapse, as well as the motility of axonal transport vesicles carrying initial ESCRT protein Hrs, and their
recruitment to SV pools. We hypothesize that these events are critical rate-limiting steps for activity-dependent
turnover of SV membrane proteins. We will test this hypothesis with three aims. In Aim 1, we will evaluate the
role of de/ubiquitination in the recycling of SV membrane proteins. Here, we will use biochemical and
fluorescence imaging assays to evaluate how ubiquitination regulates SV protein recycling vs. degradation in
hippocampal neurons. We will also investigate whether the deubiquitinating enzyme UCHL1 is necessary for
maintaining SV proteins on recycling SVs, counteracting their degradative sorting. In Aim 2, we will characterize
Hrs vesicles and the impact of Hrs on downstream ESCRT protein recruitment to SV pools. We will use super-
resolution fluorescence/electron microscopy and proximity biotinylation to characterize the morphology and
molecular composition of these vesicles, and Hrs gain- and loss-of-function combined with live imaging to
determine whether the recruitment of downstream ESCRT proteins to SV pools requires Hrs. In Aim 3, we will
investigate the mechanisms of activity-dependent Hrs recruitment to SV pools. We will test the roles of specific
kinesins in the axonal transport of Hrs, and test whether its recruitment to SV pools requires the lipid PI(3)P, the
presence of ubiquitinated proteins, and/or the small GTPase Rab35. Together, these studies will uncover
fundamental mechanisms underlying SV proteostasis in neurons.

## Key facts

- **NIH application ID:** 10162269
- **Project number:** 3R01NS080967-07S1
- **Recipient organization:** COLUMBIA UNIVERSITY HEALTH SCIENCES
- **Principal Investigator:** Clarissa Leigh Waites
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $56,675
- **Award type:** 3
- **Project period:** 2020-07-01 → 2024-03-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10162269

## Citation

> US National Institutes of Health, RePORTER application 10162269, Uncovering the roles of ubiquitination and the ESCRT pathway in degradative sorting of SV proteins. (3R01NS080967-07S1). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10162269. Licensed CC0.

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