# The Role of Nuclear PARPs in Signal-Regulated Transcription

> **NIH NIH R01** · UT SOUTHWESTERN MEDICAL CENTER · 2021 · $472,176

## Abstract

Project Summary/Abstract
 The poly(ADP-ribose) polymerase (PARP) family comprises a diverse set of proteins with a conserved
enzymatic activity that catalyzes the covalent attachment of ADP-ribose (ADPR) units from NAD+ molecules on
target proteins. Initial studies of PARPs were focused primarily on the biochemistry and molecular biology of
PARP-1 in DNA repair, but more recent studies have linked the major nuclear PARPs (PARPs 1, 2, and 3) to
the control gene expression programs in a variety of signaling-regulated biological systems, including
adipogenesis and inflammation. These studies have highlighted the role of PARP proteins in normal
physiology, beyond their well-characterized role in disease states. Although progress has been made, PARP-
related research must expand in several critical areas, with a greater emphasis on the following: (1) other
PARPs besides PARP-1, (2) a broader view of PARP molecular functions, beyond DNA repair, (3) a broader
view of PARP biology, beyond cancer and aging, (4) identification and evaluation of specific sites of ADP-
ribosylation to better understand how the modification affects the activity of target proteins, (5) the importance
of NAD+ metabolism and substrate availability, and (6) new methodologies to facilitate the study of PARPs.
 The long-term objective of these studies is to achieve a better understanding of the molecular and
biochemical mechanisms underlying the control of signal-regulated transcription by the major nuclear PARPs,
as well as the downstream physiological consequences of these regulatory events. Our broad hypothesis is
that the gene regulatory activities of the nuclear PARPs are mediated through site-specific ADP-ribosylation of
key regulatory proteins, such as histones and transcription factors. We will test this hypothesis using an
integrated approach with a complementary of set tools from biochemistry, molecular biology, cell biology,
chemical biology, proteomics, genomics, and mouse genetics. For these studies, we will focus on (1) Site-
specific histone H2B ADP-ribosylation in pro-adipogenic signaling in preadipocytes, (2) C/EBPβ-mediated pro-
adipogenic signaling in preadipocytes, and (3) STAT1a-mediated interferon g (IFNg) signaling in macrophages.
Our specific objectives are to: Characterize the genomic sites and substrates of nuclear PARP catalytic
activity, with a focus on functional outcomes of histone ADP-ribosylation (Aim 1); Determine the effects of site-
specific ADP-ribosylation on transcription factor function with a focus on C/EBPβ in preadipocytes and STAT1α
in macrophages (Aim 2); and Determine the effects of nuclear PARPs and ADP-ribosylation on physiological
outcomes with a focus on adipocyte biology (Aim 3).
 Our proposed studies will shed new light on the molecular mechanisms underlying the control of signal-
dependent gene expression by PARPs 1, 2, and 3 in preadipocytes and macrophages. They may also
suggest better ways to target the nuclear PARPs to prevent...

## Key facts

- **NIH application ID:** 10169420
- **Project number:** 5R01DK069710-17
- **Recipient organization:** UT SOUTHWESTERN MEDICAL CENTER
- **Principal Investigator:** WILLIAM Lee KRAUS
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $472,176
- **Award type:** 5
- **Project period:** 2004-09-30 → 2022-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10169420

## Citation

> US National Institutes of Health, RePORTER application 10169420, The Role of Nuclear PARPs in Signal-Regulated Transcription (5R01DK069710-17). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10169420. Licensed CC0.

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