# Development of PARP-Isoform Selective Inhibitory Chemical Probes

> **NIH NIH SC3** · ST. JOHN'S UNIVERSITY · 2021 · $123,000

## Abstract

Project Summary/Abstract
The development of highly isoform-selective poly(ADP-ribose) polymerase (PARP) biochemical probes will fill
crucial knowledge gaps that exist in our understanding of biological functions of PARP enzymes. PARPs are a
family of nuclear enzymes that catalyze poly(ADP-ribosyl)ation (PARylation) of substrate proteins such as
histones. PARylation facilitates recruitment of DNA repair proteins. Consequently, PARP inhibitors (PARPi) are
developed as a novel class of anticancer drugs that are used as single agents to treat BRCA-deficient tumors
and as combination therapy with DNA damaging agents. The PARP superfamily is comprised of 17 members.
Clinical PARPi are often associated with promiscuous inhibition of both PARP-1 and PARP-2 and some of them
even inhibit other PARPs. This becomes a potential cause for their off-target hematologic toxicity. Due to non-
specific targeting of multiple PARP-isoforms by currently known PARPi, a thorough interpretation of their
pharmacological/clinical profiles has become highly complex. Further it was shown that PARP-1 inhibition alone
is sufficient to repress the growth of MDA-MB-436 tumor xenograft. Depletion of both PARP-1 and PARP-2 led
to embryonic lethality and aggressive T-cell lymphomas. One of the challenges impeding evaluation of PARP-
isoform specific molecular interaction landscape in cellular context is the lack of potent and highly PARP-isoform
selective chemical probes. Therefore, development of highly isoform selective PARP inhibitory probes is urgently
needed. Weplan to address this by developing isoform-selective and potentially non-toxic novel PARP inhibitory
chemical probes that will allow interrogation of changes in downstream signaling events of individual PARPs at
a molecular level. The probes generated herein will also serve as template for the next generation preclinical
agents. We will apply highly potent and novel set of UTT-lead compounds to develop exquisitely PARP-isoform
selective chemical probes that will facilitate our understanding of biological functions of individual PARPs in both
normal and diseased cells. As a proof-of-concept, we have synthesized and characterized several PARPi with
nanomolar potency against both PARP-1 and PARP-2, with ~30-fold higher preference toward PARP-2. Based
on this scientific premise and preliminary data, we propose the following specific aims: (A) to identify PARP-1
and PARP-2 selective biochemical probes; (B) to conduct in vitro PARP enzyme assays and isoform selectivity
screening, and (C) to evaluate cytotoxicity of an isoform selective best PARPi in CAPAN-1 (BRCA2-/- and
BRCA2cor) and SUM149 (BRCA1-/- and BRCA1cor) cells. These studies are expected to expand our knowledge
on the impact of inhibiting a specific PARP-isoform by developed PARP chemical probes. By the end of the grant
project period, we will be poised to evaluate cell-active and highly PARP-selective chemical probes in high value
cell-based experiments. Subsequen...

## Key facts

- **NIH application ID:** 10171867
- **Project number:** 5SC3GM131971-03
- **Recipient organization:** ST. JOHN'S UNIVERSITY
- **Principal Investigator:** Tanaji T Talele
- **Activity code:** SC3 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $123,000
- **Award type:** 5
- **Project period:** 2019-07-03 → 2023-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10171867

## Citation

> US National Institutes of Health, RePORTER application 10171867, Development of PARP-Isoform Selective Inhibitory Chemical Probes (5SC3GM131971-03). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10171867. Licensed CC0.

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