# Role of methylation-dependent pathways in aging and stress

> **NIH NIH R01** · UNIV OF MASSACHUSETTS MED SCH WORCESTER · 2021 · $405,171

## Abstract

Diet and metabolism can affect how our bodies work in many ways, not just by turning excess
calories into fat. Some metabolites act as signals or can be used to modify how genes are
expressed, which can link diet to how our cells function and their capacity to respond to stress. We
propose to study how one metabolite, s-adenosylmethionine (SAM), can both activate markers of
immunity and limit how cells can change gene expression patterns in response to pathogens or other
stress. These seemingly paradoxical functions occur because SAM can be used for different cellular
needs. SAM can be used to make the phospholipid phosphatidylcholine (PC) and when PC is limited
by the diet or needed for extra membrane production, much of the SAM is used for this biosynthetic
process. However, SAM is also needed for modification of histones. Using C. elegans, we found that
low SAM acted through low PC to activate markers of innate immunity on the standard laboratory
diet. However, these same animals could not survive a bacterial challenge because they couldn't
methylate histones priming gene activation and turn up pathogen responsive genes to sufficient
levels. Thus, different contexts can change the phenotypes of low SAM, as cells need to prioritize
utilization of this metabolite.
Our proposal addresses several key questions. First, it is not known how the low SAM and PC signal
activation of the immune system. Second, it is not understood how global chromatin modification
under stress might change in low SAM and third, we don't yet understand how physiological
regulators of low SAM might affect either of these phenotypes. Our C. elegans system is an excellent
model for dissecting these mechanisms. We will combine genetic and molecular techniques
(including whole genome assays for chromatin modification) with dietary modification to determine
how SAM is linked to these phenotypes. We have used screens for SAM and PC-dependent
modifiers of immunity to identify additional regulatory components and propose to determine how
these candidates may be connected to immune activation. Furthermore, we have determined that
multiple types of stress-induced gene expression depend on SAM and will use this system to ask how
SAM and the histone methyltransferases utilizing it control transcription during stress. Although low
SAM can cause phenotypes with very distinct molecular mechanisms, such as lipid-dependent
activation of a MAP kinase in the immune response and modification of histones in transcriptional
regulation, it is important to study these processes together. SAM depletion due to diet may impact
either or both of these mechanisms, changing how our cells can respond to stress.

## Key facts

- **NIH application ID:** 10172812
- **Project number:** 5R01AG053355-05
- **Recipient organization:** UNIV OF MASSACHUSETTS MED SCH WORCESTER
- **Principal Investigator:** Amy Karol Walker
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $405,171
- **Award type:** 5
- **Project period:** 2017-09-01 → 2023-04-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10172812

## Citation

> US National Institutes of Health, RePORTER application 10172812, Role of methylation-dependent pathways in aging and stress (5R01AG053355-05). Retrieved via AI Analytics 2026-05-21 from https://api.ai-analytics.org/grant/nih/10172812. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
