# Understanding potent and novel small molecules that target HIV assembly

> **NIH NIH R21** · UNIVERSITY OF WASHINGTON · 2021 · $176,500

## Abstract

SUMMARY:
Antiretroviral drugs are critical for the survival of the ~38 million people who are currently living with HIV-1
infection. These drugs have also been used as pre-exposure prophylaxis to prevent HIV-1 infection; in
addition, they are a mainstay of possible HIV-1 cure strategies. However, development of drug resistance
threatens to undermine these successes that are critical to the health of many millions of people worldwide.
For these reasons, discovery of new antiretroviral targets and compounds that inhibit these targets is critical.
Since key HIV-1 enzymes are already targeted by drugs in current use, targets of the future will need to come
from poorly understood aspects of the viral life cycle, such as intracellular late events in the viral life cycle,
which are critical for virus production. Two decades of studying these events led to identification of a host-
catalyzed pathway of putative capsid assembly intermediates that contain the HIV-1 Gag protein and host
enzymes. A drug screen that reconstituted this assembly pathway led to discovery of PAV117, an antiretroviral
small molecule, and subsequently a more potent analog, PAV206. Preliminary data in the current proposal
demonstrate that PAV206 blocks virus production at nanomolar concentrations in T cell lines and HIV-1
infected PBMCs, making it the first potent and selective inhibitor of intracellular late events. Imaging
experiments demonstrate that PAV206 colocalizes with the viral protein Gag and also with a host enzyme
present in HIV-1 capsid assembly intermediates suggesting that this small molecule targets one or more
components of HIV-1 capsid assembly intermediates. This proposal seeks to 1) determine which retroviruses
are inhibited by PAV206, 2) identify mutations in HIV-1 that confer PAV206 resistance, and 3) use imaging
experiments to determine if PAV206 localizes to a distinct subcellular complex, and 4) use biochemical
approaches to probe for PAV206 binding partners. The subcellular localization and binding partner studies will
take advantage of PAV206 analogs that are available to us, including one that maintains antiviral activity but
contains a biotin tag for antibody recognition and a chemical group for photo-crosslinking. We provide
extensive data demonstrating how this analog can be used to great advantage for in situ imaging using the
proximity ligation assay (PLA). We also propose to extend these imaging studies using a cutting-edge
variation of this technique termed multiplex PLA. Finally, we describe a second analog of PAV206 that allows
other tags to be added through click chemistry, thereby expanding options for affinity purification of target
proteins and mass spectrometry analysis. With this impressive array of tools, our likelihood of successfully
identifying the PAV206 target is high. In conclusion, by advancing our understanding of a novel small molecule
inhibitor of HIV-1 late events, studies proposed here will provide an exciting tool for studying...

## Key facts

- **NIH application ID:** 10172846
- **Project number:** 5R21AI154963-02
- **Recipient organization:** UNIVERSITY OF WASHINGTON
- **Principal Investigator:** JAISRI R LINGAPPA
- **Activity code:** R21 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $176,500
- **Award type:** 5
- **Project period:** 2020-06-01 → 2022-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10172846

## Citation

> US National Institutes of Health, RePORTER application 10172846, Understanding potent and novel small molecules that target HIV assembly (5R21AI154963-02). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10172846. Licensed CC0.

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