# Administrative Supplement: Transport Mechanism of the Multidrug Resistance Efflux Protein, EMRE

> **NIH NIH R01** · UNIVERSITY OF WISCONSIN-MADISON · 2020 · $79,225

## Abstract

PROJECT SUMMARY/ABSTRACT
This administrative supplement proposal is for a custom-built 800 MHz solid state NMR (SSNMR) probe that will
allow detection of 1H, 19F, 31P, 13C and 15N nuclei. Until now, such probes have only been available for wide bore
magnets at a maximum frequency of 600 MHz. Now, Phoenix NMR has developed a standard bore magic-angle
spinning probe with a 1.6 mm rotor capable of spinning up to 40 kHz, with the full range of tuning configurations
to enable molecular structure determination at 800 MHz. The radio frequency solenoid coil can be tuned
simultaneously to three or four frequencies, including all the triple resonance combinations required for standard
applications (HPC, HCN, HPN) as well as novel, quadruple resonance configurations involving 19F, such as
HFPC, HFCN, and HFPN. The Phoenix probe is the only standard bore design available that supports 1H
decoupling while observing 19F and two other nuclei. We anticipate the combined improvements in resolution
and sensitivity at 800 MHz will enable complete assignments of biomolecules and complexes of molecular weight
20 to 50 kDa, as well as studies of dynamics utilizing dipolar order parameter and relaxation methods. The probe
will be used for projects in the Butcher and Henzler-Wildman laboratories and will be placed in the National
Magnetic Resonance Facility at Madison (NMRFAM) at UW-Madison, which has recently recruited SSNMR
expert Prof. Chad Rienstra (formerly U. Illinois). Thus, the probe will support at least 3 groups from within UW-
Madison and will also be accessible to an extensive outside user base. The Butcher lab will use the probe to
investigate poly-UG RNA and its association with the protein TDP-43. Due to the highly repetitive RNA
sequence, these studies will make use of site-specific 2′ fluoro groups on the RNA. A 1.0 Å crystal structure of
the free RNA has been solved and NMR assignments have been made, which will facilitate structure
determination of the complex by SSNMR. The Henzler-Wildman lab will use the probe to study how the bacterial
EmrE multi-drug transporter and its interaction with fluorinated substrates. HN-resolved 1H-19F
REDOR experiments have been performed that demonstrate the feasibility of the project.

## Key facts

- **NIH application ID:** 10173449
- **Project number:** 3R01GM095839-09S1
- **Recipient organization:** UNIVERSITY OF WISCONSIN-MADISON
- **Principal Investigator:** Katherine Anne Henzler-Wildman
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $79,225
- **Award type:** 3
- **Project period:** 2011-07-01 → 2022-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10173449

## Citation

> US National Institutes of Health, RePORTER application 10173449, Administrative Supplement: Transport Mechanism of the Multidrug Resistance Efflux Protein, EMRE (3R01GM095839-09S1). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10173449. Licensed CC0.

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