# Exploring the Ecological Role of Rothia mucilaginosa and It's Iron Binding Siderophore Enterobactin

> **NIH NIH R21** · J. CRAIG VENTER INSTITUTE, INC. · 2021 · $243,750

## Abstract

Project Summary
The oral cavity is a highly diverse microbial environment, consisting of >2000 bacterial, archaeal, and fungal
species most of which have not been functionally characterized. Numerous studies have identified that oral
Rothia mucilaginosa, a Gram-positive oral commensal Actinobacteria, is highly abundant in saliva and dental
plaque in global human populations, however, its ecological role is unknown. We identified that R. mucilaginosa
produced the catechol siderophore enterobactin, the strongest iron-chelating molecule known. We also identified
the enterobactin biosynthetic gene cluster (ent-BGC) in global Rothia genomes, which suggests that enterobactin
is crucial in Rothia ecology. The purified enterobactin compound impacted growth differentially when amended
to cultures of other oral bacterial species. It boosted the growth of commensal Streptococcus salivarius while it
reduced the growth of some strains of pathogenic S. mutans. The overarching goal of this study is to determine
the role of R. mucilaginosa produced enterobactin in interactions with both the oral microbiota and human oral
epithelial cells representing the oral mucosa. We propose an interdisciplinary research approach with two
specific aims: Aim 1: Characterization of molecular and ecological responses of oral bacteria to R.
mucilaginosa produced enterobactin. The activities of enterobactin will be characterized both in highly diverse
oral in vitro grown biofilms, and in bacterial monocultures. The capacity to import enterobactin by different
bacterial community members will be revealed by amending growth cultures with fluorescently rhodamine-
labeled enterobactin, fluorescence-activated cell sorting, and confocal microscopy. Multi-OMICS sequencing will
be conducted to characterize functional changes both in biofilm communities as well as in single and dual-
species cultures, specifically targeting genes encoding transport proteins and release mechanisms of
enterobactin. Aim 2: Determine the impact of enterobactin on oral mucosal sentinel cells. Co-cultivation
systems including both 2D and 3D models of human oral epithelial cells will be applied to study interactions with
the oral microbiota and enterobactin. Outcomes of the interactions will be characterized by using a multipronged
approach including a comparative gene transcription approach and a gene reporter system that reveals ROS
activation in host cells. Production of extracellular pro- and anti-inflammatory cytokines in cell medium relation
to enterobactin and oral bacteria will also be addressed to elucidate interactions of importance.
The proposed study provides a unique opportunity to expand our knowledge on enterobactin functional role in
the oral microbiota, and in interactions with human oral epithelial cells, which is severely lacking. A deeper
knowledge of the role of iron scavenging siderophores in the oral cavity will likely bring about a shift in the
research field of oral microbial ecology and ...

## Key facts

- **NIH application ID:** 10218502
- **Project number:** 1R21DE029625-01A1
- **Recipient organization:** J. CRAIG VENTER INSTITUTE, INC.
- **Principal Investigator:** Marcelo Freire
- **Activity code:** R21 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $243,750
- **Award type:** 1
- **Project period:** 2021-03-05 → 2023-02-28

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10218502

## Citation

> US National Institutes of Health, RePORTER application 10218502, Exploring the Ecological Role of Rothia mucilaginosa and It's Iron Binding Siderophore Enterobactin (1R21DE029625-01A1). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10218502. Licensed CC0.

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