Project 5: Structural investigation of lentiviral DNA integration

NIH RePORTER · NIH · P50 · $301,972 · view on reporter.nih.gov ↗

Abstract

P5. Abstract Retroviral replication depends on integration of reverse transcribed viral DNA into a host cell chromosome. This process is catalyzed by integrase (IN) in the context of a stable synaptic complex, known as the intasome. The intasome is the target for IN strand transfer inhibitors (INSTIs), the only class of HIV IN antagonists currently approved to treat HIV/AIDS. Recent years saw characterization of the intasomes from several retroviral species, collectively elucidating the conserved intasomal core assembly (CIC) responsible for integration. We have now established the first lentiviral intasome model based on maedi-visna virus (MVV), which affords detailed structural studies of lentiviral integration in the absence of solubilizing or hyperactivating mutations in IN. The preliminary study of the MVV intasome by single particle cryo-EM in the Cherepanov laboratory revealed that it is much larger than its non-lentiviral counterparts, comprising a hexadecamer (tetramer-of-tetramers) of IN. In the proposed project we take advantage of the new system to study lentiviral DNA integration into chromatin and the role of the host cell factor LEDGF/p75 in this process. As a translational component of this project, we will develop a lentiviral intasome model for structural studies of INSTIs and the mechanisms of drug resistance.

Key facts

NIH application ID
10219103
Project number
5P50AI150481-15
Recipient
UNIVERSITY OF PITTSBURGH AT PITTSBURGH
Principal Investigator
Peter Cherepanov
Activity code
P50
Funding institute
NIH
Fiscal year
2021
Award amount
$301,972
Award type
5
Project period
2007-08-27 → 2023-07-31