# Molecular Dissection of Aggressive B-Cell Lymphomas

> **NIH NIH P01** · MAYO CLINIC ARIZONA · 2021 · $343,287

## Abstract

Abstract 
Collectively lymphoid cancers are the 5th most common cancer in North America, with the majority being 
aggressive B-cell lymphomas. Despite modern treatment, it is recognized that defined groups of patients 
continue to experience high rates of treatment failure and poor outcomes. These groups comprise (a) the ABC 
molecular subtype of diffuse large B-cell lymphoma (DLBCL), (b) high grade tumors especially those harboring 
the MYC translocation (particularly in combination with BCL2 translocation) and (c) lymphomas that involve 
certain extranodal sites. Merely intensifying therapy does not overcome this treatment resistance – novel 
approaches are required. Over the past decade, we defined the biology of ABC DLBCL, allowing identification 
of cell vulnerabilities (“Achilles heels”) exploitable using novel targeted agents and developed clinical grade 
assays that robustly identify the disease and are currently supporting phase 3 clinical trials of these precision 
medicine approaches. There is a paucity of knowledge regarding the biology underlying the other treatment 
resistant aggressive B-cell lymphomas. Based on the blueprint provided by our success with ABC DLBCL, we 
hypothesize that a systematic examination of the genomic landscape of these understudied entities will provide 
the basis for improved outcomes by (a) identifying key common targetable cellular vulnerabilities and pathways 
providing the basis for precision medicine and (b) allowing development of accurate assays to identify this 
targetable biology and support these novel approaches. In Specific Aim 1 we will determine the incidence and 
architecture of MYC rearrangements across the aggressive B-cell lymphoma entities using fluorescence in situ 
hybridization and a novel capture sequencing approach. Specific Aim 2 is to determine the genetic 
underpinnings of aggressive B-cell lymphomas. Whole exome sequencing, RNAseq and OncoScan (for copy 
number alterations) will be performed on High grade B-cell lymphoma with MYC and BCL2 and/or BCL6 
rearrangements (“double-” and “triple-hit” lymphoma (200 cases)), High grade B-cell lymphoma not otherwise 
specified (100), plasmablastic lymphoma (50) and extranodal DLBCL (200). Integrative bioinformatics 
approaches (Biostatistics and Bioinformatics Core) will be applied to identify common targetable pathway 
perturbations and new Achilles Heels. Specific Aim 3 is to develop biomarkers that inform patient treatment 
decision. In a first step, knock-out screens of “double hit” cell lines will be performed (Functional Genomics 
Core) allowing integration with findings from Specific Aim 2 to prioritize key tumor vulnerabilities. Therapeutic 
strategies tested in these cell lines will be taken forward for preclinical testing in mouse models (Preclinical 
Models and Therapeutic Core). Then diagnostic and predictive biomarker assays will be developed to 
support clinical trials and patient management. Our consortium, with its vast tu...

## Key facts

- **NIH application ID:** 10237156
- **Project number:** 5P01CA229100-04
- **Recipient organization:** MAYO CLINIC ARIZONA
- **Principal Investigator:** David William Scott
- **Activity code:** P01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $343,287
- **Award type:** 5
- **Project period:** 2018-09-19 → 2023-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10237156

## Citation

> US National Institutes of Health, RePORTER application 10237156, Molecular Dissection of Aggressive B-Cell Lymphomas (5P01CA229100-04). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/10237156. Licensed CC0.

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