# A Short Course in Cancer Systems Biology

> **NIH NIH R25** · UNIVERSITY OF CALIFORNIA-IRVINE · 2021 · $236,835

## Abstract

Project Summary:
 This proposal seeks to establish an annual short course in Cancer Systems Biology. Systems Biology
harnesses ideas and methodologies from mathematics, physics, engineering and computer science to tackle
fundamental questions about the organization, design and performance of complex biological systems,
questions not easily addressed through traditional molecular and cellular approaches. Such questions are
particularly relevant to Cancer Biology, where perturbations at multiple levels of control systems lead to
aberrant behaviors and cascading failures in homeostasis leading to disease. The development of high
throughput data generation technologies and their application in cancer has led to a shift in focus from
individual components of cancer cells (e.g., genes) to large-scale, nonlinearly interacting networks involving
signaling and communication of cancer cells with themselves and with their microenvironment. This has
naturally led to the introduction of Systems Biology approaches into Cancer Biology and resulted in advances
in our fundamental understanding of cancer initiation, progression and response to treatment. Yet widespread
integration of Systems and Cancer Biology is hampered by a lack of training. Biologists and clinicians typically
do not receive sufficient training in mathematical, statistical and computational tools needed to apply Systems
Biology methodologies. On the other hand, physicists, mathematicians and others from non-biomedical fields
who have the theoretical and computational knowledge base needed for Systems Biology, typically lack
sufficient training in cancer biology needed to apply these methodologies to cancer. The goal of our course is
to provide a diverse group of about 20 graduate students, postdocs, and experienced researchers an intensive
three-week program at the University of California, Irvine to bridge individual training deficits that pose an
obstacle to entry into the Cancer Systems Biology field and to provide a high-level systems biology exploration
of a subset of core issues in current cancer research.
 The proposed course begins with a one-week Preparatory Workshop in either i) Mathematical and
Computational Methods, or ii) Fundamentals of Cancer Biology and Biomedicine, followed by a two-week Core
Course in which both lectures and laboratory modules are used to expose participants to cutting-edge
methodologies and research topics at the intersection between Systems and Cancer Biology. Lectures and
laboratory modules will be given by 19 UCI faculty (both academic and clinical) with research and teaching
expertise in mathematics, physics, computer science, engineering and cancer biology. The goals of the course
include (1) conveying an understanding of what Systems Biology is; (2) providing a grounding in mathematical
and computational fundamentals; (3) fostering a deep understanding of how mathematical, statistical and
computational models are used in biology and biomedicine; (4) pro...

## Key facts

- **NIH application ID:** 10249253
- **Project number:** 5R25CA214654-05
- **Recipient organization:** UNIVERSITY OF CALIFORNIA-IRVINE
- **Principal Investigator:** John Lowengrub
- **Activity code:** R25 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $236,835
- **Award type:** 5
- **Project period:** 2017-09-18 → 2023-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10249253

## Citation

> US National Institutes of Health, RePORTER application 10249253, A Short Course in Cancer Systems Biology (5R25CA214654-05). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/10249253. Licensed CC0.

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