# High Frequency of CHD1 Loss in BRCA2- Deficient African American Prostate Tumors Drives Tumor Formation by Suppressing Replication Stress

> **NIH NIH U54** · DANA-FARBER CANCER INST · 2021 · $80,332

## Abstract

PROJECT SUMMARY/ ABSTRACT. Prostatic adenocarcinoma is a cancer type with one of the most
significant racial disparity both in terms of incidence and mortality. Men of African ancestry have a significantly
worse outcome with a 2.4-fold increased mortality rate compared with men of European ancestry. While the
reasons underlying these disparities are multifactorial, there is accumulating evidence that a significant
biological and/or genetic component may be at least partially responsible for this difference. Work proposed in
this grant proposal tests one such genetic component which has been identified through complementary
preliminary studies in both Dr. Szallasi’s and Dr. Pathania’s groups. Dr. Szallasi’s group has discovered that
subclonal CHD1 (Chromodomain-helicase-DNA-binding protein 1) loss is significantly more frequent in
prostate cancer cases of African Americans (AA) than in European Americans (EA) (40% vs. 15%
respectively). A whole genome CRISPR-Cas9 based screen carried out by Dr. Pathania’s group has identified
CHD1 as one of the top gene hits which, when depleted, allowed BRCA2 deficient cells to grow in the
presence of cisplatin (commonly used chemotherapeutic agent). This is an important observation, because
BRCA2 deficient prostate cancer cases, due to the associated homologous recombination deficiency, are
increasingly considered for platinum or PARP inhibitor-based therapy. Our results suggest that CHD1 loss may
be an escape mechanism for BRCA2 (homologous recombination) deficient prostate cancer and this escape
mechanism seems to be activated more frequently in African American cases leading to their more frequent
resistance to therapy. We propose to test this hypothesis in this grant application.
 While germline BRCA2 mutations are not frequent in prostate cancer cases, we speculate that BRCA2
deficiency is more common than documented and could account for at least 20% of the cases. We suggest this
because loss of BRCA2 is not only induced by heterozygous deletion of BRCA2 (in germline mutation carriers)
but BRCA2 deficiency can also be acquired by mutation in SPOP gene which has been shown previously to
transcriptionally regulate BRCA2. SPOP gene is one of the most frequently mutated gene in prostate cancer.
We propose to understand the dynamics of CHD1 loss, SPOP loss, and BRCA2 expression and its effect on
therapy response in AA men. Completion of this study will provide us with tools to identify early changes that
occur in prostate tissue of AA prostate tissue and identify those AA prostate cancer cases that can most
benefit from PARPi and cisplatin-based therapeutic strategies.
 Finally, the fact that AA men with prostate cancer face significantly worse clinical outcome than their
European American counterparts, identifying a therapeutically targetable biological mechanism for this
difference, and to understand the drivers of chemotherapy resistance in African American men could
significantly reduce the racial disparity...

## Key facts

- **NIH application ID:** 10328013
- **Project number:** 2U54CA156732-11
- **Recipient organization:** DANA-FARBER CANCER INST
- **Principal Investigator:** Zoltan Szallasi
- **Activity code:** U54 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $80,332
- **Award type:** 2
- **Project period:** 2010-09-27 → 2023-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10328013

## Citation

> US National Institutes of Health, RePORTER application 10328013, High Frequency of CHD1 Loss in BRCA2- Deficient African American Prostate Tumors Drives Tumor Formation by Suppressing Replication Stress (2U54CA156732-11). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10328013. Licensed CC0.

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