# Personalized protein-protein interactomes and precision medicine in pulmonary arterial hypertension

> **NIH NIH R01** · BRIGHAM AND WOMEN'S HOSPITAL · 2022 · $415,581

## Abstract

Project Summary/Abstract
Pulmonary arterial hypertension (PAH) is a highly morbid cardiopulmonary disease characterized by an
obliterative vasculopathy involving distal pulmonary arterials that promotes right heart failure. Complex and
integrated pathobiological signaling pathways drive vascular remodeling in PAH: the arteriopathy includes
numerous endophenotypes (i.e., specific features, such as fibrosis, cellular proliferation, others) that occur to
differing extent across patients. Wide variability in the proteomic and genetic profile is also observed in PAH,
which accounts for phenotypic heterogeneity and inconsistent clinical response to drug therapies reported in
clinical trials and at point-of-care. Overall, these observations suggest that opportunity exists to improve clinical
outcome by individualizing the pathobiology-clinical phenotype relationship. Nonetheless, precision medicine in
PAH remains unrealized, which we postulate is due to limitations inherent in conventional analytical methods
that average biological data and overlook functionally important signaling pathways.
 Work from our laboratory and others has demonstrated the importance of studying functionally significant
signaling pathways using network medicine to discover novel and modifiable therapeutic targets in PAH. This
approach differs from classic reductionist methods that infer functionality based on transcript or protein quantity
alone, which may erroneously implicate molecular bystanders in the pathogenesis of disease. However we have
innovated a precision-based network medicine strategy that generates patient-specific protein-protein interaction
(PPI) networks (e.g., patient-level molecular wiring map). Our approach unmasks molecular interactions that
distinguish (and group together) individual patients with the same clinical phenotype. We present novel
preliminary data in the accompanying application to support the central hypothesis: Developing patient-
specific PPI networks will personalize clinical phenotyping and optimize prognosis in PAH. Our findings
will also clarify the relationship between PAH genetic risk and pathobiology on an individual-patient level, and
inform rationale and personalized drug selection using the PPI networks. To test our hypothesis, we will leverage
a rich dataset from the United Kingdom PAH Phenome Biobank. This dataset includes comprehensive
proteomic, genomic, clinical, and outcome data across two timepoints (1 yr apart) for idiopathic PAH, hereditary
PAH, asymptomatic family members of patients with PAH, including three patients that developed PAH during
the study, and healthy volunteer controls (N=500 total). The Aims are: (1) Profile patient-specific PPI networks
using proteomic and genetic data, and analyze temporal differences in network features by patient group, (2)
Develop, test, and validate a network score that informs phenotype and outcome of individual PAH patients. As
an exploratory aim, we will use the PPI networks to ...

## Key facts

- **NIH application ID:** 10331319
- **Project number:** 5R01HL155096-02
- **Recipient organization:** BRIGHAM AND WOMEN'S HOSPITAL
- **Principal Investigator:** Bradley Maron
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $415,581
- **Award type:** 5
- **Project period:** 2021-02-01 → 2025-01-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10331319

## Citation

> US National Institutes of Health, RePORTER application 10331319, Personalized protein-protein interactomes and precision medicine in pulmonary arterial hypertension (5R01HL155096-02). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10331319. Licensed CC0.

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