# Characterizing and testing the efficacy of AAV-mediated gene therapy in a novel CRISPR/Cas9 generated sheep model of Cln1 disease.

> **NIH NIH R56** · WASHINGTON UNIVERSITY · 2021 · $502,428

## Abstract

PROJECT SUMMARY
CLN1 disease or Infantile Neuronal Ceroid Lipofuscinosis (INCL or Infantile Batten disease) is one of the
earliest onset and most rapidly progressing forms of neuronal ceroid lipofuscinosis (NCL or Batten disease).
CLN1 disease is caused by deficiency in the lysosomal enzyme palmitoyl protein thioesterase-1 (PPT1). This
deficiency has a devastating and rapidly progressing effect upon affected children that starts within the first
year of life, and because there is no effective therapy available CLN1 disease is always fatal. We have
been able to dramatically improve therapeutic outcomes in PPT1-deficient mice by targeting adeno-associated
viral (AAV)-mediated gene therapy to the central nervous system (CNS) regions that are most affected,
including the spinal cord. However, unlike other forms of NCL, such therapeutic effects are limited to the CNS
regions that are transduced. As such, successfully translating gene therapy for CLN1 disease into the clinic will
be a significant challenge in the much larger and more complex brain of a child. To overcome this obstacle, we
shall use a novel CRISPR/Cas9 generated CLN1 R151X sheep model to refine our therapeutic strategy,
assessing the delivery, dosing, safety and efficacy of gene therapy in a larger species that is ideally
suited for translating these advances. We recently published that these CLN1 R151X sheep display
pronounced CLN1 disease-relevant phenotypes. Our preliminary data extend these observations, revealing an
earlier onset of neurologic disease, and widespread histologically and radiologically detectable pathology that
is more pronounced than in PPT1-deficient mice. We have also shown that an intracranial injection of an AAV9
vector expressing PPT1 raises expression of this enzyme in the brain of sheep to supraphysiological levels.
We believe CLN1 R151X sheep not only more accurately model human CLN1 disease, but also provide an
ideal testing ground for optimizing the dosing and delivery of gene therapy in a fashion that is not possible in
mice. We now propose to characterize the progression of these disease phenotypes in CLN1 R151X sheep, in
order to provide detailed landmarks of disease progression using both MRI and MRS imaging, correlating
these data with histological findings (Aim 1). We will also define the parameters of vector dosing and delivery
routes to achieve widespread transduction of the sheep brain and spinal cord, and elevate PPT1 activity to
levels predicted to be capable of producing therapeutic benefit (Aim 2). Finally, we shall determine the
therapeutic efficacy, minimum effective dose, safety and clinical response to this optimized delivery of scAAV9-
CCAG-PPT1 to the brain and spinal cord of CLN1 R151X sheep (Aim 3). These data will allow us to refine our
gene therapy approach, and position us for entry into the CREATE-Bio development program towards clinical
translation of the first effective treatment of this devastating disease.

## Key facts

- **NIH application ID:** 10357987
- **Project number:** 1R56NS117635-01A1
- **Recipient organization:** WASHINGTON UNIVERSITY
- **Principal Investigator:** JONATHAN D COOPER
- **Activity code:** R56 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $502,428
- **Award type:** 1
- **Project period:** 2021-07-01 → 2022-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10357987

## Citation

> US National Institutes of Health, RePORTER application 10357987, Characterizing and testing the efficacy of AAV-mediated gene therapy in a novel CRISPR/Cas9 generated sheep model of Cln1 disease. (1R56NS117635-01A1). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/10357987. Licensed CC0.

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