# CD4 T cell intrinsic signaling defects during viral exhaustion

> **NIH NIH R21** · UNIVERSITY OF IOWA · 2022 · $193,125

## Abstract

Project Summary:
Chronic stimulation through the T cell receptor (TCR) drives T cells to progressively lose their ability to exert
their effector functions in a process termed exhaustion. T cell exhaustion occurs during both cancer and
persistent infections contributing to the failure of the adaptive immune response to control the tumor or
infection. CD8 T cell exhaustion was initially described during chronic lymphocytic choriomeningitis virus
(LCMV) infection. However, CD4 T cells control the delicate balance between the maintenance of effector CD8
T cell responses versus the development of CD8 T cell exhaustion during chronic infection. Despite their
critical role in maintaining the antiviral CD8 T cell response, much less is known about the specific signaling
defects and metabolic changes that occur within exhausted CD4 T cells. Gene expression studies examining
LCMV-specific CD4 T cells have indicated that hundreds of genes are differentially expressed between CD4 T
cells isolated during an acute versus chronic LCMV infection and that these genetic changes are different for
CD4 T cells versus CD8 T cells. Many of the differentially expressed genes in CD4 T cells are related to TCR
signaling and metabolic pathways, but how these alterations lead to specific defects in TCR signaling and
cellular metabolism has not been defined. Our long-term goal is to understand the mechanisms that mediate
CD4 T cell dysfunction during chronic viral infections and cancer progression. The objective of this application
is to determine the specific defects in CD4 T cell signaling and metabolic pathways that develop during chronic
LCMV infection. Our central hypothesis is that virus-specific CD4 T cells develop multiple defects in critical
signaling pathways downstream of the TCR and metabolic pathways, resulting in the impaired ability of the
CD4 T cell to mediate effector activity and proliferate during a chronic viral infection. Our hypothesis is based
our own preliminary data, in conjunction with published genetic studies, indicating that expression of multiple
signaling and metabolic proteins are reduced in virus-specific CD4 T cells following a persistent LCMV Clone
13 infection. The rationale for the proposed research is that, once the principal signaling and metabolic defects
affecting exhausted CD4 T cells are identified, new and innovative therapeutic approaches can be targeted to
restore CD4 T cell effector activity and enhance clearance of chronic viral infections and human cancers. We
will achieve the goals of this proposal by pursuing the following two specific aims: 1) Examine the effects of
viral exhaustion on early TCR signaling and function in CD4 T cells and 2) Investigate the impact of viral
exhaustion on metabolism in CD4 T cells. The completion of these aims will determine if T cell exhaustion after
infection with a chronic virus results in CD4 T cell intrinsic changes in the signaling capacity and metabolic
function that would impact effect...

## Key facts

- **NIH application ID:** 10359809
- **Project number:** 5R21AI157121-02
- **Recipient organization:** UNIVERSITY OF IOWA
- **Principal Investigator:** Jon C.D. Houtman
- **Activity code:** R21 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $193,125
- **Award type:** 5
- **Project period:** 2021-02-25 → 2025-01-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10359809

## Citation

> US National Institutes of Health, RePORTER application 10359809, CD4 T cell intrinsic signaling defects during viral exhaustion (5R21AI157121-02). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10359809. Licensed CC0.

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