# Selective interactome vulnerability across the Alzheimer’s disease spectrum

> **NIH NIH R56** · SLOAN-KETTERING INST CAN RESEARCH · 2021 · $1,162,517

## Abstract

ABSTRACT
Our application proposes to identify interactome network vulnerabilities in brain regions and cell populations that
are selectively dysregulated in Alzheimer's disease (AD). The goals are to discover across the AD spectrum the
mechanisms underlying such selective vulnerability. To gain systems level insights into interactome
dysfunctions, we propose to make use of our discoveries in stress biology linking interactome network
perturbations to the formation of long-lived oligomeric scaffolds termed epichaperomes, and of a novel `omics
platform called chaperomics that provides direct information on interactome network changes. Our preliminary
studies show epichaperomes change how thousands of proteins interact and negatively impact interactome
networks important for neuronal function, including synaptic plasticity, cell-to-cell communication, protein
translation, cell cycle re-entry, axon guidance, metabolic processes and inflammation, leading to network-wide
dysfunction and cognitive decline. Studies in transgenic mice and iPSC-derived neurons position epichaperome
formation as an event that negatively impacts cellular function, from early in the disease process and throughout
disease progression. Studies in transgenic mice and AD patients suggest epichaperome formation within AD
vulnerable brain regions. These studies enable us to hypothesize accumulation of epichaperomes, and in turn
of epichaperome-mediated interactome network imbalances, over decades, not only results in defects within
intrinsic neuronal proteins and protein pathways but also intercellularly, where it disrupts intrinsic network
connectivity of cells and of brain circuits. We posit vulnerable neurons and brain regions (e.g., hippocampus and
regions of the default mode network) have a higher propensity to accumulate epichaperomes, and in turn
epichaperome-mediated dysfunctions, due to their intrinsic anatomy and biochemistry. In line with PAR-19-070,
we intend to test these hypotheses within clinically and neuropathologically well-characterized postmortem
human brains. We aim to investigate the regional and temporal trajectory of epichaperome formation (Aim 1)
and to determine the negative impact of epichaperome formation on brain regions selectively vulnerable in AD
(Aim 2). We also plan to explore neural cell populations most affected by this newly recognized pathologic
mechanism (Aim 3). Outcomes are first-of-a-kind insights into the spatio-temporal distribution of epichaperomes
across the AD spectrum and their relationship to clinical, pathologic and genetic vulnerabilities. Outcomes are
also proteome-wide insights into interactome networks' vulnerabilities and dysfunctions, both on their nature and
trajectory in vulnerable brain regions. Raw datasets and data analytics from interactome network studies will be
deposited into free-access portals for mining and hypothesis generating access by the scientific community. A
web-based user-interface will be designed to faci...

## Key facts

- **NIH application ID:** 10386016
- **Project number:** 1R56AG072599-01
- **Recipient organization:** SLOAN-KETTERING INST CAN RESEARCH
- **Principal Investigator:** GABRIELA CHIOSIS
- **Activity code:** R56 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2021
- **Award amount:** $1,162,517
- **Award type:** 1
- **Project period:** 2021-05-15 → 2023-04-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10386016

## Citation

> US National Institutes of Health, RePORTER application 10386016, Selective interactome vulnerability across the Alzheimer’s disease spectrum (1R56AG072599-01). Retrieved via AI Analytics 2026-05-28 from https://api.ai-analytics.org/grant/nih/10386016. Licensed CC0.

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