# Tumor suppressing pathways in renal cancer

> **NIH VA I01** · CINCINNATI VA MEDICAL CENTER RESEARCH · 2022 · —

## Abstract

Clear cell renal cell carcinoma (ccRCC) is a serious health concern for military personnel, particularly males beyond
40 years of age, including military veterans. According to The Defense Medical Epidemiology Database for 1995-2004
the incidence of RCC specifically for military members after the 4th decade of life is dramatically increased to 8.5 as
compared to 1.5 cases per 100,000 person-years of the overall incidence. This proposal investigates direct
mechanistic connection between selective autophagy and glucose metabolism in the context of renal cancer
cells. Autophagy is a tightly regulated process of self-digestion. Formation of an autophagosome requires
lipidation and insertion of microtubule associated protein 1 light chains A, B and C (MAP1LC3A, B, C, referred
to as LC3A, LC3B, and LC3C) into the autophagosomal membrane. We established that LC3C autophagy is
tumor suppressing and functions downstream form VHL, tumor suppressor lost in clear cell renal cell carcinoma.
LC3C is an evolutionary late gene, present only in higher primates and humans, that contains a unique and
conserved C-terminal 20 amino acid peptide that is cleaved during initiation of LC3C autophagy. The C-terminal
peptide of LC3C has a proline hydroxylation motif similar to the canonical motifs in HIFαs, where prolines are
hydroxylated by 2-oxyglutarate (2OG)-dependent EGLN proline hydroxylases. Our preliminary data indicate that
P133 within the LC3C peptide undergoes hydroxylation by EGLN3 proline hydroxylase in an autophagy-
dependent manner. Recently we discovered that LC3C autophagy requires glucose metabolic flux. In turn, loss
of LC3C increases the steady-state levels of glycolytic and pentose phosphate metabolites, representing
hallmarks of oncogenic form of metabolism (Warburg effect) particularly relevant in ccRCC. We determined that
LC3C co-immunoprecipitates and targets for autolysosomal degradation malate/2-oxyglutarate(2OG) and
aspartate /glutamate antiporters, SCL25A11 and SLC25A13, respectively that are part of the mitochondrial
malate-aspartate shuttle (MAS). MAS transfers reducing equivalents between mitochondria and cytoplasm,
yielding mitochondrial NADH for ATP synthesis while generating cytosolic NAD to sustain glycolysis. Additionally,
the shuttle exchanges glutamate and aspartate that contributes to biosynthetic potential. We propose a novel,
metabolism-coupled mechanism of tumor suppressing LC3C activity: LC3C autophagy targets MAS proteins for
lysosomal degradation in the process of mitophagy. This acts as a checkpoint for glycolysis by regulating
cytosolic NAD/NADH ratio, as well as for SLC25A13-mediated export of aspartate from mitochondria. That
indicates that LC3C metabolically partners with transcriptional effects of VHL inhibiting glycolysis. Moreover, we
hypothesize that selective activation of LC3C autophagy in the proximity to mitochondrial carriers is caused by
2OG derived from glucose through the TCA cycle and transported through the S...

## Key facts

- **NIH application ID:** 10426280
- **Project number:** 5I01BX001110-11
- **Recipient organization:** CINCINNATI VA MEDICAL CENTER RESEARCH
- **Principal Investigator:** Maria F Czyzyk-Krzeska
- **Activity code:** I01 (R01, R21, SBIR, etc.)
- **Funding institute:** VA
- **Fiscal year:** 2022
- **Award amount:** —
- **Award type:** 5
- **Project period:** 2011-07-01 → 2025-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10426280

## Citation

> US National Institutes of Health, RePORTER application 10426280, Tumor suppressing pathways in renal cancer (5I01BX001110-11). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10426280. Licensed CC0.

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