Project Summary Muscle is a contractile tissue that generates forces and motions vital for animal survival. The molecular and cellular mechanisms governing its structural and functional integrity are not well understood. Selective dysfunction and degeneration of neuromuscular tissues have been observed in disease conditions featuring mitochondrial abnormality, emphasizing the particular importance of mitochondria to the functionality and integrity of muscle tissues. Mitochondria play important roles in cellular bioenergetics as well as other essential aspects of cellular physiology. The mitochondrial processes that are essential for the structural and functional integrity of skeletal muscle, and how these processes are regulated in health and disease are poorly defined. It is becoming increasingly clear that fundamental mechanisms underlying the development, function, and maintenance of skeletal muscle are conserved across metazoans. Thus genetic model organisms are poised to make significant contributions to our understanding of these mechanisms. In our previous studies, we have used Drosophila as a model to demonstrate the importance of Numb/Notch signaling and asymmetric progenitor cell division during muscle development, and PINK1/Parkin-directed mitochondrial quality control in skeletal muscle maintenance. We have also used the fly neuromuscular junction (NMJ) as a model to dissect synaptic mechanisms involved in age- related neurodegenerative diseases. In our most recent studies, we have found that protein quality control in the mitochondrial intermembrane space (IMS) is important for skeletal muscle function and maintenance. We found that dipeptide repeats (DPRs) derived from unconventional translation of the GGGGCC (G4C2) hexanucleotide repeat expansion in C9ORF72, the most common genetic cause of amyotrophic lateral sclerosis (ALS) called c9ALS, disrupt mitochondrial function by altering IMS proteostasis and inner membrane (IM) architecture. Our genetic modifier screens identified a number of signaling pathways in mitigating this ALS-related muscle pathology. The goal of this proposal is to use proteomic, molecular genetic, and cell biological tools to define the mechanism of action of the identified genetic pathways, in an effort to achieve a holistic view of the regulation and function of mitochondrial IM architecture in skeletal muscle function and maintenance. Two Specific Aims will help us reach this goal. In Aim 1, we will examine the molecular mechanisms of how c9ALS disease gene product disrupts muscle mitochondrial IMS/IM structure and function. Novel genetic tools will be used to perform ultrastructural studies and find the interactome of DPR within these structures. In Aim 2, we will delineate the cellular quality control mechanisms that maintain IMS/IM integrity by restraining the synthesis or promoting the metabolism of DPR. The role of these quality control mechanisms in maintaining mitochondrial and skeletal muscle structu...