# Project 3: Microbiota generated aryl sulfates and secondary bile acids in cardiometabolic disease

> **NIH NIH P01** · CLEVELAND CLINIC LERNER COM-CWRU · 2022 · $473,989

## Abstract

Abstract
 A few microbiome-derived metabolites have been implicated in human disease, but the microbiota
produce hundreds of additional metabolites that are not well studied. Moreover, many of these chemicals
possess disease connections which have not yet been explored in detail. In unpublished collaborative studies
with Project 1 using untargeted metabolomics as a discovery platform, we uncovered two such metabolite
classes with members whose levels are correlated with the risk of developing cardiometabolic disease: aryl
sulfates and secondary bile acids.
 Aryl sulfates, the focus of Aim 1, including indoxyl sulfate (IS) and p-cresol sulfate (pCS), derive
exclusively from gut microbiota generated metabolites and their plasma levels correlate with cardiovascular
disease (CVD) risk. Through untargeted metabolomics in subjects with preserved renal function we identified
new (previously unknown) Aryl sulfates in plasma that are microbial in origin and associated with CVD.
 Secondary bile acids, Aim 2: The bile acid pool is remarkably concentrated and consists almost entirely
(98%+) of microbiome-derived bile acids. Because bile acids are present in high concentrations, a compound
that makes up even 1% of this pool is present at biologically relevant concentrations. In screening studies with
Projects 1 & 2 (Hazen & Brown) among T2DM patients we discovered plasma levels of two bile acid sub-
classes strikingly correlate with disease risks, lithocholic acid (directly correlated with CVD) and
isoDCA/isoLCA (inversely correlated with T2DM). To date, it has been difficult to directly test the role of gut
microbiota generated metabolites like aryl sulfates and secondary bile acids due to the inability to `toggle'
individual metabolites on/off within a host. Leveraging our expertise in metabolic pathway discovery and
microbiome gene editing we have enabled studies of causality and mechanism for two key classes of gut
microbiota-derived molecules, aryl sulfates and secondary bile acids.
 We take a parallel approach in Aims 1 and 2 that starts with powerful human metabolomics data that links
microbiome-derived metabolites to CVD and T2DM (Aims 1a/2a). We will predict biosynthetic pathways for
metabolites that emerge from these analyses (Aims 1b/2b), create gain- and loss-of-function mutants in these
pathways, and validate them in vitro (Aims 1c/2c). We will then validate the pathways in vivo by colonizing
germ-free mice with strain or community pairs that differ only in the production of the metabolite of interest
(Aims 1d/2d). We will then use these carefully controlled mice to study the role of the microbial enzyme and
metabolite of interest in phenotypes relevant to CVD and T2DM (Aims 1e-f/2e-f).

## Key facts

- **NIH application ID:** 10447071
- **Project number:** 5P01HL147823-04
- **Recipient organization:** CLEVELAND CLINIC LERNER COM-CWRU
- **Principal Investigator:** MICHAEL ANDREW FISCHBACH
- **Activity code:** P01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $473,989
- **Award type:** 5
- **Project period:** 2019-09-01 → 2024-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10447071

## Citation

> US National Institutes of Health, RePORTER application 10447071, Project 3: Microbiota generated aryl sulfates and secondary bile acids in cardiometabolic disease (5P01HL147823-04). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10447071. Licensed CC0.

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