# Strategies to improve outcomes for TNBC patients that integrate subtype-specific genomic and immune-based discoveries

> **NIH NIH P50** · VANDERBILT UNIVERSITY MEDICAL CENTER · 2022 · $336,917

## Abstract

PROJECT SUMMARY/ABSTRACT: STRATEGIES TO IMPROVE OUTCOMES FOR TNBC
PATIENTS INTEGRATING SUBTYPE-SPECIFIC GENOMIC AND IMMUNE-BASED DISCOVERIES
Triple-negative breast cancer (TNBC) is one of the most aggressive subtypes of breast cancer, representing
~25% of all breast cancer deaths due to lack of effective therapies. To address this challenge, our team
integrated expertise in molecular genetics, oncology and bioinformatics, and 1) classified TNBC into distinct
molecular subtypes with unique signaling, biologic and immune features, and 2) discovered and validated
novel gene rearrangements in oncogenic and immune-regulatory genes that provide a diverse array of
mechanisms by which TNBC tumors evade immune surveillance. Many tumor cells co-opt innate and adaptive
immune system mechanisms through direct upregulation of PD-L1 or through recruitment of immune
suppressive cells. These forms of immune evasion are in play for tumors with high gene mutation burdens,
such as select TNBC subtypes. In the current period, we discovered that some TNBC tumors with high
mutation loads remain “immune cold” due to absence of immune cells in the tumor and enrichment of immune
suppressive cells in the microenvironment. Immunotherapies targeting the PD-1/PD-L1 pathway continue to be
a paradigm shift in the treatment of metastatic cancers with high mutation rates, thus it is critical to understand
how to align appropriate TNBC patients with this therapeutic advance. As combination chemo-immunotherapy
advances toward FDA approval for metastatic TNBC, it further catalyzes the need to understand how specific
chemotherapeutic agents can enhance TNBC subtype-specific response to anti-PD-1/PD-L1 therapy in order
to determine the most efficacious combinations. The mechanisms by which chemotherapy modulates
neoantigen burden, T-cell function, and immune-suppressive cell function in TNBC are largely unknown. We
propose to test the interrelated hypotheses that: (1) standard chemotherapies modulate tumor
immune response targeted by anti-PD-L1 therapy in a TNBC-subtype specific manner; and (2) subtype-specific
TNBC preclinical models will provide insights to chemotherapy-specific systemic and tumor microenvironment
mechanisms of immune suppression. The project's Specific Aims are: Aim 1: To determine mechanisms by
which standard chemotherapies modulate tumor immune response in combination with checkpoint
immunotherapy; Aim 2: To determine mechanisms by which by tumor secreted proteins and exosomes
modulate the immune system in metastatic TNBC subtypes; and Aim 3: To evaluate the feasibility of targeting
the tumor microenvironment myeloid-derived cells. IMPACT: Our overall goal is improved outcomes for TNBC
patients through alignment of combination therapy directed by knowledge of TNBC subtypes and
immunomodulatory features. Through the comprehensive analysis of biospecimens, our established multi-
disciplinary team will develop biomarkers for PD-L1 response and define the effects of...

## Key facts

- **NIH application ID:** 10456742
- **Project number:** 5P50CA098131-20
- **Recipient organization:** VANDERBILT UNIVERSITY MEDICAL CENTER
- **Principal Investigator:** JENNIFER A PIETENPOL
- **Activity code:** P50 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $336,917
- **Award type:** 5
- **Project period:** 2003-08-07 → 2024-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10456742

## Citation

> US National Institutes of Health, RePORTER application 10456742, Strategies to improve outcomes for TNBC patients that integrate subtype-specific genomic and immune-based discoveries (5P50CA098131-20). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/10456742. Licensed CC0.

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