# Development of an autophagy-specific inhibitor for evaluation as a therapeutic strategy in cancer.

> **NIH NIH F31** · UNIVERSITY OF ILLINOIS AT CHICAGO · 2022 · $44,677

## Abstract

ABSTRACT
Autophagy is a major catabolic recycling process that is critical for cellular homeostasis, especially under
stressful conditions, such as hypoxia and nutrient deprivation. Autophagy has been implicated in numerous
disease states, including cancer. Cancer cells can utilize autophagy for proliferation and tumorigenesis, providing
a means for survival in stressful conditions such as chemotherapeutic treatment. Therefore, autophagy inhibition
shows promise as a treatment option in these cases. While current efforts have evaluated inhibition of the lipid
kinase VPS34, the involvement of this kinase in both the autophagy (Complex I) and vesicle trafficking (Complex
II) pathways leads to inhibition of both pathways. This lack of selectivity has led to the limited use of autophagy
inhibition as a therapeutic strategy in cancer. Unlike VPS34, ATG14L is only found in the autophagy initiation
complex, where it facilitates key protein-protein interactions (PPIs). The hypothesis of this proposal is that small-
molecule inhibition of the ATG14L-Beclin 1 PPI will selectively disrupt Complex I and inhibit autophagy without
disrupting other processes controlled by Complex II. To test this hypothesis, optimization of potency and in vitro
DMPK of small molecule leads will be performed as described in Aim 1. To accomplish this, a cellular NanoBRET
assay was optimized to develop a high-throughput screen (HTS) to discover molecules that inhibit the ATG14L-
Beclin 1 PPI. An initial screen of 2560 compounds in this assay revealed 19 hits which inhibited the interaction.
Of these 19 hits, one compound was selected due its dose-dependent inhibition of this PPI and its potency.
Counterscreens revealed that this compound specifically inhibited Complex I formation and did not affect
Complex II vesicle trafficking. A synthetic route to access analogues has been developed. The hit compound will
be optimized for potency, toxicity, aqueous solubility, and microsomal stability to generate a lead with desirable
properties for future in vivo studies. This lead molecule will be evaluated as an autophagy-specific probe through
testing in Aim 2. Screening in 15 cancer cell lines will analyze single-agent efficacy and will identify biomarkers
that predict sensitivity or resistance to autophagy inhibition. Chemotherapeutics will also be combined with the
lead to determine if selective autophagy inhibition has additive or synergistic effects with established
chemotherapeutics in resistant cell lines. The results of these studies will reveal the utility of autophagy inhibition
as a therapeutic strategy in cancer and will enable selection of a patient population that could benefit from
autophagy inhibition therapy. Collaborative efforts from the sponsor, co-sponsor, and their respective trainees
will allow for feedback that improves experimental design, oral and written communication, and future direction
of the work. Coupling this with the extensive Research Resource Center and ...

## Key facts

- **NIH application ID:** 10460133
- **Project number:** 5F31CA265072-02
- **Recipient organization:** UNIVERSITY OF ILLINOIS AT CHICAGO
- **Principal Investigator:** Ryan Scott Hippman
- **Activity code:** F31 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $44,677
- **Award type:** 5
- **Project period:** 2021-08-16 → 2024-08-15

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10460133

## Citation

> US National Institutes of Health, RePORTER application 10460133, Development of an autophagy-specific inhibitor for evaluation as a therapeutic strategy in cancer. (5F31CA265072-02). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10460133. Licensed CC0.

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