# Combination of Transcriptomic and Metallomic Biomarkers for Risk Assessment in Locoregional Clear Cell Renal Cell Carcinoma

> **NIH NIH K08** · UNIVERSITY OF CALIFORNIA AT DAVIS · 2022 · $261,072

## Abstract

PROJECT SUMMARY
The overall goal of this K08 Mentored Career Development proposal is to provide me with the essential
mentorship and career development opportunities, necessary to become an independent investigator with
expertise in translational research. Kidney cancer is among the top ten most common cancers, with an estimated
76,000 new cases every year in the Uniter States. Management of patients with localized or locally advanced
clear cell renal cell carcinoma (ccRCC) involves surgical resection, following which, half of the patients will have
a recurrence within five years. Adoption of adjuvant therapies to lower this risk has been poor due to inconsistent
results across trials. There is a lack of biomarkers to predict the recurrence risk accurately, a critical barrier in
directing adjuvant therapies to this group of patients. This proposal will investigate novel translational approaches
to identify patients at high risk of relapse after surgical removal of the primary kidney tumor. In Specific Aim 1, I
hypothesize that a prognostic transcriptomic signature comprised of genes corresponding to electron transport
chain (ETC), mitochondrial ribosomal proteins (MRP) and major histocompatibility complex-II (MHC-II) will result
in stratification of localized ccRCC tumors into the two subtypes- those at risk of early relapse vs. not. In Specific
Aim 2, I hypothesize that Cu-bound to mitochondrial cytochrome c oxidase (Cu-COX), measured by size
exclusion chromatography inductively coupled plasma mass spectrometry will be indicative of mitochondrial
respiration and will be predictive of early relapse, thus making for a simple and inexpensive biomarker. In
addition, we will be evaluating the clinical relevance of different pools of copper in serum as predictors of high
copper content in corresponding ccRCC tumors, thus enabling a serum-based biomarker to detect aggressive
ccRCC. Data generated from this proposal will allow me to perform additional research, including validation of
these biomarkers in larger studies, development of novel clinical-trials to direct adjuvant therapies in a biomarker
specified population at high risk of relapse, and ultimately improve outcomes for patients with kidney cancer.
University of Cincinnati, provides me collaborative opportunities with several laboratory and clinical researchers,
thus making this an ideal environment to conduct my research while providing clinical and administrative support.
My background in clinical and translational cancer research, including experience in collaborating with laboratory
scientists and focus on biomarker development, will help me to successfully attain my short-term goals including
training in the fields of cancer biology, functional genomics and bioinformatics. To this end, I have assembled a
team of mentors and advisors, all of whom are expert investigators in these disciplines. To supplement my
training aims, I plan on completing relevant workshops. Through the K08 Career De...

## Key facts

- **NIH application ID:** 10507031
- **Project number:** 1K08CA273542-01
- **Recipient organization:** UNIVERSITY OF CALIFORNIA AT DAVIS
- **Principal Investigator:** Shuchi Gulati
- **Activity code:** K08 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $261,072
- **Award type:** 1
- **Project period:** 2022-09-16 → 2027-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10507031

## Citation

> US National Institutes of Health, RePORTER application 10507031, Combination of Transcriptomic and Metallomic Biomarkers for Risk Assessment in Locoregional Clear Cell Renal Cell Carcinoma (1K08CA273542-01). Retrieved via AI Analytics 2026-05-27 from https://api.ai-analytics.org/grant/nih/10507031. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
