# Developing Broad-Spectrum Antivirals Targeting Coronavirus Replicase and Helicase

> **NIH NIH U19** · UNIV OF NORTH CAROLINA CHAPEL HILL · 2022 · $6,734,714

## Abstract

ABSTRACT
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiologic agent of COVID-19 has caused
over 700,000 deaths in the U.S. and over 4.8 million deaths worldwide. The pandemic’s true public health,
economic and social cost continues to expand. Inadequate vaccination rates coupled with the perpetual evolution
of SARS-CoV-2 variants of concern (VOCs) have fueled waves COVID-19 in unvaccinated and vaccinated
groups. We led IND-enabling preclinical studies for two COVID-19 antiviral therapies: the FDA approved
intravenous drug remdesivir and the oral antiviral, molnupiravir, which is now in Phase 3 clinical trial. For COVID-
19 and future emerging CoV epidemics, we need multiple oral broadly-active antivirals with disparate
mechanisms of action to robustly inhibit virus replication and minimize the potential for resistance in outpatients.
Here, in Project 2 of the READDI-AC program, we leverage decades of drug discovery, medicinal chemistry,
biochemistry, enzymology and coronavirology expertise for the identification, validation, optimization and
preclinical evaluation of novel small molecule antivirals targeting the conserved CoV RNA-dependent RNA
polymerase (RdRp, nsp12) and helicase (Hel, nsp13). Together with the READDI-AC Core Labs and
pharmaceutical leaders Takeda and Chimerix we articulate a platform for drug discovery and development in
the following Specific Aims: 1) Identify and validate small molecules targeting SARS-CoV-2 RdRp and Helicase
active and allosteric sites using multiple complementary approaches for discovery (e.g. fragment based, DNA-
encoded library, small molecule enzymatic assay, and cell-based antiviral screens). As RdRp is a validated drug
target, early discovery efforts prioritize Hel. Validated biochemical assays and cell-based antiviral assays drive
hit discovery and iterative structure activity relationship (SAR) studies to improve upon and understand activity.
We use “Fleximer” medicinal chemistry to generate new chemical matter from existing nucleoside analogs (e.g.
Molnupiravir) and/or optimize hits from screening efforts. Top candidates will be evaluated and down selected
based on antiviral performance in primary culture systems. 2) Medicinal chemistry transforms hits into leads in
iterative SAR studies. For each lead, the breadth of antiviral activity, mechanism of action and resistance are
determined in both biochemical and virologic assays. 3) We collaborate with industry partners to optimize leads
into drug candidates for pharmacokinetic, safety and preclinical efficacy studies in robust models of acute and
chronic COVID-19 disease. We have five leads currently in hand from Takeda, Chimerix, Pardes and academic
collaborators for in vivo testing. Project 2 will provide a comprehensive IND-enabling preclinical data package
for successful RdRp and Hel molecules positioning them for human trials.

## Key facts

- **NIH application ID:** 10513685
- **Project number:** 1U19AI171292-01
- **Recipient organization:** UNIV OF NORTH CAROLINA CHAPEL HILL
- **Principal Investigator:** Timothy Patrick Sheahan
- **Activity code:** U19 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2022
- **Award amount:** $6,734,714
- **Award type:** 1
- **Project period:** 2022-05-16 → 2026-04-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10513685

## Citation

> US National Institutes of Health, RePORTER application 10513685, Developing Broad-Spectrum Antivirals Targeting Coronavirus Replicase and Helicase (1U19AI171292-01). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/10513685. Licensed CC0.

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