# Next Generation Sequencing Shared Resource

> **NIH NIH P30** · UNIVERSITY OF FLORIDA · 2023 · $70,048

## Abstract

NEXT GENERATION SEQUENCING SHARED RESOURCE (NGS-SR): ABSTRACT
The Next Generation Sequencing Shared Resource (NGS-SR) provides the University of Florida Health Cancer
Center (UFHCC) members with access to centralized, state-of-the-art, cost-effective next generation sequencing
services to advance cancer research. The NGS-SR is an institutionally-managed shared resource supported by
UFHCC through a partnership with the UF Interdisciplinary Center for Biotechnology Research, a campus-wide
shared biotechnology resource. Located within the Cancer & Genetics Research Complex providing convenient
access for UFHCC members, NGS-SR includes 4 staff members under the supervision of Moraga, who has over
30 years of experience in DNA sequencing technologies. During the recent COVID-19 pandemic, the NGS-SR
was identified as an essential campus resource and remained staffed and open to the UF research community.
NGS-SR service requests and invoicing are managed via the CrossLab laboratory management system. Key
sequencing technologies available include instruments from Illumina (NovaSeq6000, MiSeq), PacBio SEQUEL
IIe, Oxford Nanopore PromethION, and the 10x Genomics Chromium single-cell RNA-Seq and VISIUM spatial
transcriptomics platforms. Raw sequencing read data are directly transferred to the HiPerGator high-
performance computing cluster for downstream bioinformatics analysis. UFHCC investments in instrumentation
include the Illumina NovaSeq6000, PacBio SEQUEL IIe, mosquito® liquid handling robot, and 10x Genomics
Chromium single cell platform. The NGS-SR works in collaboration with the UFHCC Biostatistics and
Quantitative Sciences Shared Resource to provide no cost consultation in effective experimental design and
best practices in computational analysis of large-scale multi-omic data sets. NGS-SR supports studies in DNA
structural and gene variant analysis, microbiome and metagenome analysis, bulk and single cell ATAC-Seq and
RNA-Seq, ChIP-Seq, and whole genome sequencing. Since 2016, 54 unique members have used NGS-SR, of
which 45 have peer-reviewed funding. There has been an increase in the number of members using NGS-SR
each year and an increase in sequencing runs, supporting 54 peer-reviewed publications, with 24% having IF
>10. Mechanisms of Oncogenesis and the Cancer Therapeutics and Host Response members represent major
users. The effectiveness of the NGS-SR in meeting member needs is assessed by annual surveys, feedback
from the NGS-SR Scientific Advisory Group, and recommendations from the Shared Resources Oversight
Committee. In response to user requests for lower costs, the acquisition of the NovaSeq6000 reduced
sequencing costs by 50% and the use of robotics has reduced RNA-Seq library prep costs by 75%. In alignment
with the UFHCC Strategic Plan, Momentum 2027, the demand for NGS-SR services is anticipated to grow with
recruitments in molecular epidemiology, immunobiology, and RNA epigenetics. In response, NGS-SR will
continue to lower costs...

## Key facts

- **NIH application ID:** 10625767
- **Project number:** 1P30CA247796-01A1
- **Recipient organization:** UNIVERSITY OF FLORIDA
- **Principal Investigator:** David Moraga
- **Activity code:** P30 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2023
- **Award amount:** $70,048
- **Award type:** 1
- **Project period:** 2023-06-01 → 2027-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10625767

## Citation

> US National Institutes of Health, RePORTER application 10625767, Next Generation Sequencing Shared Resource (1P30CA247796-01A1). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10625767. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
