# Sulfide metabolism and signaling

> **NIH NIH R35** · UNIVERSITY OF MICHIGAN AT ANN ARBOR · 2024 · $537,906

## Abstract

The liminal zone between host epithelium and gut microbiota is rich in sulfide conversations that
are modulated by diet; their short- and long-range impacts on systemic H2S homeostasis
represent a largely unexplored terrain ripe for discovery. The toxicity of H2S, first described as a
noxious “acidic vapor” some 500 years ago, results from its inhibition of complex IV in the electron
transport chain (ETC) and explains the ubiquitous presence of sulfide quinone oxidoreductase
(SQOR) in mitochondria along with other sulfide oxidation pathway enzymes, for H2S disposal.
The past cycle witnessed exciting advances, including the discovery of an unorthodox redox
cofactor configuration, comprising an active site trisulfide, which affords the SQOR reaction an
~105-fold catalytic advantage, and characterization of the first clinical mutations in SQOR, which
present with brain pathology typical of Leigh disease. We discovered that plasticity embedded in
the mammalian ETC, which allows diversion of electrons to fumarate as a terminal acceptor when
the capacity to use O2 is restricted by H2S. The ensuing reductive shift in the ETC, propagates
beyond the mitochondrion via metabolic shuttles and redox cofactor pools, enhancing aerobic
glycolysis, lipid biogenesis and reductive carboxylation in the Krebs cycle. In the next cycle, we
will build on this exciting momentum as well as a wealth of preliminary data, introducing multi-
omics approaches (metabolomics, RNA-Seq and CRISPRi) combined with cellular and genetic
models of inducible SQOR deficiency (whole body or intestinal epithelium) to the rigorous
biochemical foundations of our program. We will characterize the allosteric regulation of H2S
biogenesis and clearance by metabolites identified from an unbiased screen, quantify the
potential of H2S to tune O2 affinity of complex IV, and assess its impact on the hypoxic response.
We will focus on the host-gut microbe interface, which we estimate accounts for ~70% of systemic
sulfide homeostasis, and evaluate how its modulation by dietary methionine, microbial
composition and host genotype influences brain pathology in control versus SQOR deficient mice.
Advanced microscopic techniques, including live-cell imaging with biosensors to monitor ATP
pools and redox shifts, will be used to elucidate H2S-induced changes to mitochondrial membrane
potential, morphology and fusion. And we will uncover the molecular basis of the correlation
between a graded decrease in gut reuterin (derived from Lactobacillus reuteri), and increasing
tumor burden in colorectal cancer and the associated increase in host sulfur metabolites. We will
continue to leverage the flexibility of the R35 funding mechanism for the sustained and innovative
interrogation of the impact of H2S chemical biology in health and disease.

## Key facts

- **NIH application ID:** 10762812
- **Project number:** 2R35GM130183-06
- **Recipient organization:** UNIVERSITY OF MICHIGAN AT ANN ARBOR
- **Principal Investigator:** RUMA V BANERJEE
- **Activity code:** R35 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $537,906
- **Award type:** 2
- **Project period:** 2019-01-01 → 2028-12-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10762812

## Citation

> US National Institutes of Health, RePORTER application 10762812, Sulfide metabolism and signaling (2R35GM130183-06). Retrieved via AI Analytics 2026-05-28 from https://api.ai-analytics.org/grant/nih/10762812. Licensed CC0.

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