# Anaerobic Microbiology Research Core

> **NIH NIH P20** · OKLAHOMA STATE UNIVERSITY STILLWATER · 2024 · $563,970

## Abstract

ABSTRACT
 Many Earth ecosystems are devoid of oxygen and are populated by strictly anaerobic microorganisms that
contribute essential functions to their microbiomes. To study these microbiomes, the Oklahoma Center for
Microbiome Research (OCMR) COBRE aims to provide cutting-edge tools to identify and cultivate strict anaerobes.
However, cultivating and characterizing anaerobes requires a highly specialized skillset of exceptional laboratory
practices. To provide these research tools an Anaerobic Microbiology Research Core will be established. The
Anaerobic Core will support all five research projects in the OCMR, which focus on the roles of anaerobes in their
respective hosts. Project 1 (Huang) will determine the genetic basis by which pathogenic anaerobes stimulate oral
cancer progression. Project 2 (Kirchberger) will characterize and manipulate host determinants of newly discovered
Microviridae that frequently dominate the gastrointestinal tract (GIT) virome by developing anaerobic model
systems. Project 3 (Lin) will investigate the interactions of dietary carotenoids and anaerobic members of the GIT,
which work together to lessen systemic inflammation. Project 4 (Stubbendieck) will identify and characterize
pathogen-specific secondary metabolites produced by commensal anaerobes of the human aerodigestive tract.
Project 5 (Vazquez Sanroman) will determine how gut anaerobes induce dysbiosis in the adolescent microbiome-
gut-brain axis during opioid abuse and withdrawal in the search for treatments to mitigate the associated debilitating
behavioral changes in these patients. The common theme of these diverse projects is the role of anaerobes and
the need to study them further. To advance the projects and enable the RPLs to transition to independent R01
funding, the Anaerobic Core will provide resources for anaerobic microbiology that support their research programs.
Therefore, the primary goal of the Anaerobic Microbiology Core will be to centralize and expand the anaerobic
culturomics resources, services, and training available to COBRE investigators to achieve their specific research
aims and long-term career goals. To meet these research goals, the OCMR Anaerobic Core will provide: 1)
Culturomics to enable high throughput culture isolation under a wide range of growth conditions and oxygen
concentrations, 2) Targeted enrichment to isolate specific microbes based on phenotypic traits, 3) Sequence-
guided culture isolation using nanobody-tags to specific organisms followed by cell sorting and targeted cultivation,
4) Culture storage and record keeping, and 5) Downstream services for culture identification and characterization,
microbial community analysis, and genomics. Achieving these specific aims will establish a Research Core for
Anaerobic Microbiology that accelerates the aforementioned research projects and the entire community of OSU
microbiome researchers.

## Key facts

- **NIH application ID:** 10771558
- **Project number:** 1P20GM152333-01
- **Recipient organization:** OKLAHOMA STATE UNIVERSITY STILLWATER
- **Principal Investigator:** Mostafa S Elshahed
- **Activity code:** P20 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $563,970
- **Award type:** 1
- **Project period:** 2024-02-01 → 2029-01-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10771558

## Citation

> US National Institutes of Health, RePORTER application 10771558, Anaerobic Microbiology Research Core (1P20GM152333-01). Retrieved via AI Analytics 2026-06-01 from https://api.ai-analytics.org/grant/nih/10771558. Licensed CC0.

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