# Regulatory Circuitry and Mechanisms Controlling Cell Fate in C. elegans

> **NIH NIH R35** · COLUMBIA UNIV NEW YORK MORNINGSIDE · 2024 · $642,676

## Abstract

Genetic analysis in model organisms such as C. elegans continues to excel as a fundamental approach to
discovering how cells, tissues, and organs communicate with each other to control development, and to
identifying the signaling components, modulators and mechanisms that govern these processes. Aberrant
activity of these same signaling pathways has profound effects on human health, most notably causing cancer,
congenital defects, and diverse physiological disorders. Regulating signaling appropriately—in space or cell
population, in time, strength or duration, or in combination with other signaling inputs—is thus crucial both for
normal development and for understanding human disease, and is the overarching theme of the proposed work.
 Much of the proposed work concerns Notch, a transmembrane protein that functions as a receptor in cell-
cell interactions that control development in all animals. Our overall goal is to elucidate the regulatory logic and
mechanisms that regulate Notch activity and that coordinate its activity with other highly conserved major
signaling systems to ensure precise and robust cell fate outcomes. C. elegans is amenable to combining
traditional genetic analysis with genome engineering using CRISPR/Cas9 to apply many different methods for
manipulating and visualizing endogenous genes and their products. These tools, combined with genetically-
encoded signaling biosensors, cell-specific transcriptome profiling, and long-term imaging, allow for
unprecedented insight and resolution into signaling regulation and integration.
 Our proposed work will fill three Key Gaps for which we performed foundational work during the current
funding period. Key Gap 1 addresses questions about the mechanism by which ligands activate Notch signal
transduction, arising from our recent discovery of unexpected evolutionary plasticity in the force-dependent
mechanism of Notch activation. Our investigations in this area may prove to be relevant to specific mammalian
contexts and to suggest novel strategies for modulating ligand-Notch interactions in clinically-relevant settings.
Key Gap 2 concerns a universal feature of animal development, "lateral inhibition" or "lateral specification." In
this process, Notch-mediated interactions between initially equivalent cells engage feedback loops that amplify
a stochastic, small initial difference between them to resolve their fates. New tools we developed during the
current funding period will allow us to delve deeper into the stochastic events and feedback mechanisms in an
archetypal case of lateral specification, the Anchor Cell/Ventral Uterine precursor cell fate decision during
gonadogenesis. Key Gap 3 concerns how developmental progression of different organs is coordinated, as is
necessary to ensure coherent development. We will build on our findings of inter-organ signaling mediated by
conserved pathways that control development of the reproductive system. The overall impact of pursuing these
area...

## Key facts

- **NIH application ID:** 10842090
- **Project number:** 2R35GM131746-06
- **Recipient organization:** COLUMBIA UNIV NEW YORK MORNINGSIDE
- **Principal Investigator:** Iva S Greenwald
- **Activity code:** R35 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $642,676
- **Award type:** 2
- **Project period:** 2019-05-01 → 2029-03-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10842090

## Citation

> US National Institutes of Health, RePORTER application 10842090, Regulatory Circuitry and Mechanisms Controlling Cell Fate in C. elegans (2R35GM131746-06). Retrieved via AI Analytics 2026-05-28 from https://api.ai-analytics.org/grant/nih/10842090. Licensed CC0.

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