# Molecular probes for cellular investigation of metalloenzymes

> **NIH NIH R35** · UNIVERSITY OF TEXAS AT AUSTIN · 2024 · $419,778

## Abstract

Project Summary/Abstract
Metals are essential micronutrients that are required for proper functioning of cells and organisms, and their
distribution and speciation (the metallome) is tightly controlled by complex homeostatic machinery. Deviations
from metal homeostasis are associated with multiple pathologies, environmental metal contamination, and metal
deficiencies, which all have important effects on cellular function. The metallome is defined by two main metal
ion pools: the labile metal ion pool in which metals are weakly bound and exchangeable and the tightly-bound
metal ion pool in which metals are ligated to biomolecules with high affinity. Metalloproteins that constitute the
tightly-bound metal ion pool represent one third of the proteome and within these proteins, metals have diverse
structural and catalytic functions. These metalloproteins exist in several metalation states, including apo (metal-
free), holo (metal-bound), and mismetalated. These states are controlled by several factors, including metal ion
availability and the presence of metal transporters or metallochaperones. The Que lab is interested in studying
how the metalation state of metalloproteins in the cellular environment responds to changes in metal ion
availability and other biological stimuli. There are several broad questions that drive our research: (1) are there
biological or abiological scenarios in which metals in metalloproteins are labile and exchangeable rather than
tightly-bound, making these proteins vulnerable to metal ion loss or demetalation? (2) What factors govern how
vulnerable a metalloprotein is to demetalation? (3) How does this knowledge impact our understanding of the
biological function of these enzymes and their relation to human health and disease? Our strategy to tackle these
questions is to develop fluorescent probes that allow us to monitor metalloprotein expression and metalation
dynamics in live cells. We specifically target metalloenzymes due to the important chemical reactions they
catalyze and the presence of an open coordination site in their active site that can be targeted using metal-
binding, inhibitor-inspired fluorogenic molecules. In the previous granting period, we demonstrated our ability to
produce fluorescence turn-on probes for the ubiquitously expressed carbonic anhydrase (CA) and antibiotic
resistance enzyme New Delhi Metallo-𝛽-lactamase (NDM). These probes revealed that CA-bound zinc is not
labile in cells whereas NDM-bound zinc is labile, with metal loss being observed after NDM-expressing E. coli
were treated with metal chelators. In the next five years, our first goal is to improve the properties of our
fluorescent probes to increase their sensitivity and enable multiplexed imaging. Our second goal is to target
additional metalloenzymes in order to expand our biological scope and elaborate on our probe design principles.
Our third goal is to further explore the lability of zinc sites in three clinically relevant meta...

## Key facts

- **NIH application ID:** 10842947
- **Project number:** 2R35GM133612-06
- **Recipient organization:** UNIVERSITY OF TEXAS AT AUSTIN
- **Principal Investigator:** Emily L Que
- **Activity code:** R35 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $419,778
- **Award type:** 2
- **Project period:** 2019-09-01 → 2029-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10842947

## Citation

> US National Institutes of Health, RePORTER application 10842947, Molecular probes for cellular investigation of metalloenzymes (2R35GM133612-06). Retrieved via AI Analytics 2026-05-29 from https://api.ai-analytics.org/grant/nih/10842947. Licensed CC0.

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