# Germline mutations of PTPN11 (SHP2) in the stem cell microenvironment

> **NIH NIH R01** · EMORY UNIVERSITY · 2024 · $440,263

## Abstract

Project Summary
Noonan Syndrome (NS), a developmental disorder characterized by congenital heart disease, dysmorphic
facial structures, short stature, and mental retardation, is caused by germline mutations in the genes involved
in the Ras signaling pathway. Patients with NS are at an increased risk of developing leukemia. The
mechanisms underlying the leukemogenesis are not completely understood. NS is mainly (>50%) associated
with germline heterozygous activating mutations in the protein tyrosine phosphatase PTPN11 (SHP2), and NS
patients with PTPN11 mutations have the worst prognosis. Studies from our laboratory and others have
established the causal role of hematopoietic cell intrinsic PTPN11 mutations in the pathogenesis of NS-
associated leukemia. Notably, in the last funding period we discovered that PTPN11 activating mutations
(E76K or D61G) in the bone marrow (BM) stroma, specifically Nestin-expressing and Nestin-expressing cell-
derived mesenchymal stem cells and osteoprogenitors, contributed significantly to the development/
progression of hematological malignancies in mouse models. However, our understanding of the effects of
PTPN11 disease mutations in the BM microenvironment is still incomplete. Our recent pilot data indicate that
PTPN11 activating mutations in the peripheral nervous system (PNS) and other neural crest-derived progeny
in the BM stroma also exert detrimental effects on resident HSCs  neural crest-specific PTPN11E76K mutation
knock-in mice (PTPN11E76K/+/Wnt1-Cre+) developed a myeloproliferative neoplasm (MPN), and this malignancy
originated from wild-type hematopoietic stem cells (HSCs). Furthermore, a donor cell-derived MPN (D-MPN)
developed in PTPN11E76K/+/Wnt1-Cre+ mice transplanted with healthy BM cells. The overall objective of this
application is to decipher the cellular and molecular mechanisms by which the PTPN11 mutation in neural
crest-derived cells in the BM stroma induce a MPN. The central hypothesis of the proposal is that the PTPN11
mutation in these microenvironmental cells drives leukemia development by directly and/or indirectly
hyperactivating resident HSCs. We plan to test this hypothesis and accomplish the objective of this application
by pursuing the following three aims. 1). To identify the cell type, protein factors, and/or neurotransmitters that
mediate the leukemogenic effect of PTPN11 activating mutations in the PNS and other neural crest derivatives
in the BM stroma. 2). To determine the molecular mechanisms by which PTPN11 gain-of-function activating
mutations deregulate the activities of the PNS and other neural crest-derived cells. 3). To validate the
pathogenic effects of BM microenvironmental PTPN11 disease mutations with NS patient specimens and
patient-derived cells. The research proposed in this application will not only greatly advance our understanding
of the mechanisms underlying the leukemogenesis in NS, but also inform the rational design of new
therapeutic interventions for pr...

## Key facts

- **NIH application ID:** 10872201
- **Project number:** 5R01HL130995-08
- **Recipient organization:** EMORY UNIVERSITY
- **Principal Investigator:** CHENG-KUI QU
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $440,263
- **Award type:** 5
- **Project period:** 2016-08-05 → 2026-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10872201

## Citation

> US National Institutes of Health, RePORTER application 10872201, Germline mutations of PTPN11 (SHP2) in the stem cell microenvironment (5R01HL130995-08). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/10872201. Licensed CC0.

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