Designing chemoenzymatic approaches to biologically active molecules enabled by enzyme library screening

NIH RePORTER · NIH · K99 · $125,000 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY Biocatalysis is quickly emerging a set of synthetic power tools for the direct synthesis of chemical matter. By leveraging enzymes, Nature’s chemical palette for molecular editing, chemists have been able to readily decorate molecules with high complexity, in a highly selective fashion. The potential of biocatalysis has been illustrated in its growing use in the pilot scale preparation of therapeutics to treat serious human illness. This proposal approaches chemoenzymatic synthesis using biocatalysts from two vantage points. In the first case, the focus is on retrosynthesis guided enzyme discovery by comparison to known biosynthetic pathways. This will be used to enable the preparation of polyhydroxylated tropolones, highly oxygenated aromatic small molecules that have broad bioactivities that span from antimicrobial to antiviral and antineoplastic applications. In a different vein, biocatalysts will be used to expedite the synthesis of spirocyclic tropolone natural products, malettinins B, C and E. In both cases, enzymes are borrowed from bacterial and fungal tropolone biosynthesis. This approach will extend into independent research into the synthesis of spiroisoxazoline small molecules, compounds with equally potent bioactivities isolated from marine sponges, via library screening of cytochrome P450 enzymes. In a different lens, the proposal will also delve into investigative reaction design by searching for hidden reaction pathways across enzyme families. This approach will first be investigated in the context of amino acid functionalization by using a library of native pyridoxal phosphate (PLP)-dependent enzymes that perform a wide range of reactions in Nature. Although the enzymes perform differing reactions, the presence of the PLP cofactor drives the reactivity. This mentored research approach will be translated into independent research on terpene cyclase enzyme libraries for the enzymatic synthesis of carbocycles via cationic rearrangement and cyclization reaction development.

Key facts

NIH application ID
10876426
Project number
5K99GM151479-02
Recipient
UNIVERSITY OF MICHIGAN AT ANN ARBOR
Principal Investigator
Kendrick Linwood Smith
Activity code
K99
Funding institute
NIH
Fiscal year
2024
Award amount
$125,000
Award type
5
Project period
2023-07-01 → 2025-06-30