# Targeting MicroRNAs to Eradicate Leukemia Stem Cells

> **NIH NIH R01** · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · 2024 · $480,469

## Abstract

PROJECT SUMMARY
Leukemia stem cells (LSCs) are at the apex of the acute myeloid leukemia (AML) cellular hierarchy. The
quiescent fraction of LSCs provides a reservoir of self-renewing cells that sustain leukemia growth, prevent clonal
exhaustion, and are treatment resistant; thus, eliminating LSCs is the `holy grail' of any anti-leukemia treatment.
In previous studies, we showed that miR-126 is necessary to maintain a quiescent subfraction of LSCs that
prevent clonal exhaustion. We demonstrated how SPRED1/miR-126 autoregulatory loop in LSCs and in BM
endothelial cells (ECs) converge to increase miR-126 levels in LSCs, protect them and support leukemia growth.
We showed that high miR-126 levels are due to both LSC autonomous mechanisms, resulting in enhanced
endogenous production, and non-autonomous mechanisms, through exogenous miR-126 supply from ECs.
To deplete miR-126 in LSCs and ECs, we designed a novel oligodeoxynucleotide anti-miR-126 inhibitor, called
miRisten. Our data show that pharmacological miR-126 deprivation by miRisten significantly decreases LSC
endogenous production of miR-126 and decreases the exogenous supply of endothelial miR-126. The net result
is a significant decrease of miR-126 that damages the homeostasis and activity of LSCs, as demonstrated in
serial transplant experiments. In addition, we now have evidence that miR-126 enhances mitochondrial
metabolism (i.e., oxidative phosphorylation) and mitochondrial dynamics (i.e., mitochondrial fusion) in LSCs
through SPRED1/ERK/p-BCL-2/NRF2 signaling. Accordingly, depletion of miR-126 by miRisten treatment
significantly downregulates BCL-2 and disrupts mitochondrial metabolism, leading to increased levels of reactive
oxygen species and apoptosis of LSCs. In addition, miRisten disrupts LSC mitochondrial function by upregulating
the dynamin related protein 1 (DRP1), inducing mitochondrial fission, decreasing mitochondrial membrane
potential, and inducing expression of mitophagy marker proteins. Since mitochondria-centered metabolism is
the main metabolic energetic source for LSCs, we propose to dissect how miRisten exploits the mitochondrial
metabolic vulnerability as a novel mechanism of action to eliminate LSCs. Furthermore, after conducting
Investigational New Drug application (IND)-enabling pharmacokinetic, pharmacodynamic and toxicology studies,
we will rapidly translate miRisten from bench to beside with a first-in-human phase 1 clinical trial of miRisten in
patients with relapsed/refractory (r/r) AML. The central hypothesis of this proposal is that miRisten targets miR-
126-depended metabolic vulnerability of LSCs and will provide a novel therapeutic approach for LSC elimination
in AML. We propose the following Specific Aims (SAs): SA#1: Determine the mechanisms of miRisten-induced
mitochondrial metabolic vulnerability in LSCs. SA#2: Conduct pharmacokinetic, pharmacodynamic, efficacy
and toxicology studies of miRisten to inform dose and schedule selection for human studies....

## Key facts

- **NIH application ID:** 10892946
- **Project number:** 5R01CA205247-08
- **Recipient organization:** BECKMAN RESEARCH INSTITUTE/CITY OF HOPE
- **Principal Investigator:** YA-HUEI KUO
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $480,469
- **Award type:** 5
- **Project period:** 2017-08-01 → 2025-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10892946

## Citation

> US National Institutes of Health, RePORTER application 10892946, Targeting MicroRNAs to Eradicate Leukemia Stem Cells (5R01CA205247-08). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10892946. Licensed CC0.

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