# HIV-1 Intasome Assembly and Function

> **NIH NIH R01** · OHIO STATE UNIVERSITY · 2024 · $465,704

## Abstract

PROJECT SUMMARY / ABSTRACT
New HIV-1 infections continue to drive a worldwide pandemic. Combinatorial anti-retroviral therapies (cART)
have helped to blunt the clinical outcomes of HIV-1 infected individuals. However, drug-resistance mutations
continue to challenge cART regimens underscoring the importance of identifying new viral drug targets.
HIV-1 integration into the human genome is essential for a productive infection. Integration is catalyzed by the
retrovirus encoded integrase (IN) that forms a complex with the long terminal repeat (LTR) ends of the viral
cDNA, produced by reverse transcription of the HIV-1 genomic RNA. The resulting intasome precisely positions
the LTR-ends for catalytic strand-transfer into a genomic target site. Structural comparisons show that all seven
retrovirus genera maintain a central Conserved Intasome Core (CIC) containing a tetramer of IN. Some
retrovirus family members expand the structure surrounding the CIC by appending additional IN subunits. For
example, the prototype foamy virus (PFV) intasome assembles into a simple IN-tetramer while the mouse
mammary tumor virus (MMTV) forms an IN-octamer by attaching IN-dimers to either side of the CIC. IN octamer,
decamer, dodecamer (12-mer) and hexadecamer (16-mer) intasomes have been reported for HIV-1.
Remarkably, the contributions of IN-multimer architecture to HIV-1 biology is largely unknown.
The IN-assembly progressions that result in a fully formed HIV-1 intasome are similarly unknown. During
infection, reverse transcription and intasome assembly occurs at or near the nuclear membrane. The host
cofactor LEDGF/p75 appears to facilitate chromatin localization of the HIV-1 intasomes, and deletion of
LEDGF/p75 reduces HIV-1 integration at least 10-fold. We have found the non-conserved peptides linking well-
known conserved IN domains control HIV-1 IN-multimer architecture, and that LEDGF/p75 is necessary for
efficient HIV-1 intasome assembly in vitro. These observations underpin several key unanswered questions:
What are the factors that guide IN multimer progressions resulting in a fully assembled HIV-1 intasome? What
is the function of LEDGF/p75 in HIV-1 intasome assembly and/or chromatin interactions? How does HIV-1 IN-
multimer architecture impact genomic target site selection in cellulo?
We propose to utilize innovative real-time single molecule imaging and analysis to understand the contributions
of IN-multimer architecture on HIV-1 mechanics with the following Specific Aims: 1.) determine the IN assembly
progressions that control HIV-1 intasome architecture, 2.) determine the role of HIV-1 intasome architecture on
the dynamic interactions with defined target DNA and chromatin in vitro, and 3.) determine the role of HIV-1
intasome architecture on targeting host chromatin features in cellulo.
 These studies are designed to interrogate the animated processes that support HIV-1 intasome architecture
 with the goal of identifying additional retroviral progressio...

## Key facts

- **NIH application ID:** 10914291
- **Project number:** 5R01AI150496-07
- **Recipient organization:** OHIO STATE UNIVERSITY
- **Principal Investigator:** KRISTINE E YODER
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $465,704
- **Award type:** 5
- **Project period:** 2016-12-15 → 2028-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10914291

## Citation

> US National Institutes of Health, RePORTER application 10914291, HIV-1 Intasome Assembly and Function (5R01AI150496-07). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10914291. Licensed CC0.

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