Spatial genomics analysis of tumor samples

NIH RePORTER · NIH · R44 · $998,481 · view on reporter.nih.gov ↗

Abstract

SUMMARY Imaging the tumor microenvironment (TME) is key to understanding tumor growth, disease progression and therapy options. The TME often consists of a complex neighborhood of diverse populations of immune cells, fibroblasts, and tumors cells. Little is known about the “geography” of the tumors and the spatial organization of the distinct cell types. The ability to rapidly identify different cell types and tumor subtypes using molecular markers will be transformative for cancer diagnostics. At Spatial Genomics, we are commercializing technology that allows transcript profiling in tumor samples. With this technology, cell types in situ and spatial organizations can be directly identified and visualized in tumor tissue slices. These capabilities provide a powerful tool for examining the different cell types and their interactions in the tumor microenvironment. In this proposal, we will develop the reagents, instrumentation, and the associated software that will allow researchers to perform spatial mapping experiments in tumor slices.

Key facts

NIH application ID
10918314
Project number
5R44CA285121-02
Recipient
SPATIAL GENOMICS, INC.
Principal Investigator
Kirsten Frieda
Activity code
R44
Funding institute
NIH
Fiscal year
2024
Award amount
$998,481
Award type
5
Project period
2023-09-01 → 2025-08-31