# eMOA: A Multi-Omic Service for Mechanism of Action Determination in Drug Screening

> **NIH NIH R44** · ECLIPSE BIOINNOVATIONS INC · 2024 · $295,756

## Abstract

Summary
The pathway to a successful drug development program is getting more challenging and expensive every year.
Currently, bringing a single therapeutic compound to market starts in early discovery by the broad screening of
tens of thousands of molecules and is usually followed by a series of precise assays to reduce the number of
compounds to a handful of candidates. For these candidates to enter clinical trials, regulatory agencies are now
demanding that the molecular mechanism of action is well understood. Traditionally, that meant years of basic
research using low throughput and complicated assays within a research program. The combination of the
secondary screening assays together with the basic research needed to understand the mechanism of action
can not only be very costly, but also create delays for these new therapeutic agents to reach patients. Currently,
some of the secondary screens measure gene expression levels using transcriptomics, shotgun proteomics as
well as a combination of other omics approaches. Recently, regulation of translation has emerged as a new
mechanism by which drugs can act on cellular functions. For example, the mTOR pathway that regulates cell
proliferation, apoptosis, autophagy, and other cellular processes, participates in multiple cell-signaling pathways
directly influencing translation of specific mRNAs. Several compounds inhibiting the mTOR pathway have been
identified, including Torin 1 and Sapanisertib, and their mechanism of action have been shown to be through
direct inhibition of translation. Eclipsebio’s eRibo Count will be modified for higher throughput screening of small
molecules and used to commercially deploy a secondary drug screen platform, called eMOA, that will use both
transcriptomics and translatomics to rapidly narrow down the number of candidate molecules of interest. Phase
I will focus on screening for a monoclonal antibody that will reduce signal to noise as well as identify basic
parameters, such as sequencing depth and library complexity, that will allow for successful identification of
candidate compounds with precise mechanism of action information. Phase II will incorporate the Phase I
development and findings to allow drug screening via the eMOA platform to be performed in a 96-well plate,
allowing for mid throughput screening. In addition, eMOA will be used to screen a library of ~1,500 distinct,
clinically relevant compounds with detailed mechanism of action. This will be used to train a machine learning
model that will enable classification of unknown compounds for rapid identification of their mechanism of action.
This drug screening platform will be further developed to include a rich user interface enabling customers to
better understand their new therapeutics. Eclipsebio will provide the eMOA platform as a white-glove service for
biotech and pharma to shorten their research cycle, providing better compounds to patients in clinical trials.

## Key facts

- **NIH application ID:** 10922502
- **Project number:** 1R44GM154583-01
- **Recipient organization:** ECLIPSE BIOINNOVATIONS INC
- **Principal Investigator:** Alexander A Shishkin
- **Activity code:** R44 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $295,756
- **Award type:** 1
- **Project period:** 2024-07-01 → 2024-12-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10922502

## Citation

> US National Institutes of Health, RePORTER application 10922502, eMOA: A Multi-Omic Service for Mechanism of Action Determination in Drug Screening (1R44GM154583-01). Retrieved via AI Analytics 2026-05-26 from https://api.ai-analytics.org/grant/nih/10922502. Licensed CC0.

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