# Nanoscale assembly of amyloid oligomers at physiologically relevant conditions

> **NIH NIH R01** · UNIVERSITY OF NEBRASKA MEDICAL CENTER · 2024 · $428,073

## Abstract

Assembly of nanoaggregates by amyloid beta (Ab), as a widely accepted model for development of Alzheimer’s disease
(AD), has recently gained additional support. The vast majority of in vitro studies are performed at Ab concentrations
several orders higher than the physiologically relevant concentrations of Aβ in the brain; no nanoscale assembly of Aβ is
observed at the low nanomolar concentration found in vivo. This suggests that the assembly of Aβ in vivo utilizes pathways
different from those used in vitro. We discovered that spontaneous assembly of Aβ42 oligomers from monomers, within
the physiological concentration range, can occur by utilizing the on-surface aggregation mechanism. Here, the surface acts
as a catalyst for the aggregation process. We developed a model that explains the surface catalytic effect of the amyloid
aggregation from monomers, at low nanomolar concentrations. In the model, the membrane effectively catalyzes amyloid
aggregation by stabilizing aggregation-prone conformations. According to our preliminary data, this process depends on the
membrane composition; therefore, we hypothesize that the change of the membrane composition is the factor that defines
the assembly of the disease-prone Aβ aggregates. This hypothesis is supported by findings that aging is associated with
changes in lipid composition and alterations of fatty acids at the level of lipid rafts were found in the early stage of AD. A
thorough testing of this hypothesis is the major goal of this application. The rationale is that understanding the fundamental
mechanisms of membrane-mediated Aβ nanoscale assembly will guide the development of practical approaches to control
the aggregation process. The objective of this proposal is to characterize the on-surface formation of Aβ nanoscale
assemblies, identify the aggregation-prone composition of cellular membranes, and develop a quantitative molecular model
for future use in translational studies. Guided by strong preliminary data, we will test our central hypothesis through the
following three specific aims: Aim 1: Characterize the nanoscale assembly processes of Ab monomers catalyzed by cellular
membranes with different lipid compositions. Aim 2: Evaluate contributions of free lipids on the membrane catalysis of
amyloid nanoassembly. Aim 3: Develop a molecular model for the membrane catalysis phenomenon using multi-scale
theoretical and computational approaches. Aim 1 is focused on testing our hypothesis that the lipid composition of the
membrane bilayer is the defining factor in spontaneous aggregation of Ab proteins at physiological concentrations. Under
Aim 2, we will test the hypothesis that free lipids contribute further to the membrane catalysis of amyloid aggregation. Aim
3 proposes the use of various theoretical approaches and computer modeling to gain structural insights into the molecular
mechanism of aggregation by the cellular membrane. The predictions of the theory will be tested under Aims 1 and...

## Key facts

- **NIH application ID:** 10932919
- **Project number:** 5R01GM148537-02
- **Recipient organization:** UNIVERSITY OF NEBRASKA MEDICAL CENTER
- **Principal Investigator:** YURI L LYUBCHENKO
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $428,073
- **Award type:** 5
- **Project period:** 2023-09-25 → 2027-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10932919

## Citation

> US National Institutes of Health, RePORTER application 10932919, Nanoscale assembly of amyloid oligomers at physiologically relevant conditions (5R01GM148537-02). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/10932919. Licensed CC0.

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