# Molecular Profiling & Characterization

> **NIH NIH P30** · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · 2024 · $309,481

## Abstract

The Molecular Profiling and Characterization Core is the heart of the UIUC Neuroproteomics Center on Cell-Cell
Signaling. Understanding the role of brain chemistry in health, pain management, drug addiction, and withdrawal
requires knowledge of the molecules within the brain and their associated neurochemical pathways. The large
assortment of chemical messengers and the diversity of their chemical and physical properties require a complex
suite of measurement techniques and integrated approaches for dissecting the molecular components of cell-to-
cell communication. Mass spectrometry (MS) is a central technique for precise molecular profiling and
characterization of complex neurological systems. The primary mission of the Molecular Profiling and
Characterization Core is to augment our understanding of addiction-associated processes using MS-based
analytics to provide qualitative, quantitative, and functional data on the molecular drivers involved in cell-cell
signaling. Positioned between the Sampling and Separation Core and Bioinformatics, Data Analytics and
Predictive Modeling Core, this core executes defined studies with maximal data quality and provides tailored MS
methods for enabling user-specific experiments that lie at or near current technological limits. We have the
outstanding analytical capabilities and well-documented expertise to effectively probe diverse signaling
components within tissues, individual cells, and their extracts and releasates with spatial and temporal resolution.
These measurements capitalize on the careful study design and rigorous execution by professional staff capable
of developing and implementing validated methods across the Center. Between the University of Illinois at
Urbana-Champaign and Northwestern University, we are well-equipped with an extensive suite of high-
resolution, tandem mass spectrometers and sampling capabilities that are suitable for imaging and molecular
analysis of neuropeptides, metabolites, proteins, proteoforms, and protein complexes across a wide molecular-
weight range. For targeted and omics-level investigations, defined study designs are categorized as “Bottom-
Up” shotgun approaches in which proteins are digested to various extents prior to MS analysis, and the “Top-
Down” approach in which the intact proteins or whole native protein complexes are introduced into the mass
spectrometer for structural characterization by tandem MS at proteoform-level resolution. We exploit the
complementarity of these approaches within the context of specific Center-supported research projects to
maximize the molecular specificity and coverage for identification and quantitation of proteins and their post-
translational modifications. Future studies will benefit from high-resolution information on relative and absolute
amounts of bioactive neuropeptide and metabolite levels obtained in either targeted or discovery modes of
operation. We also employ MS imaging approaches to illuminate the “hidden” pep...

## Key facts

- **NIH application ID:** 10934861
- **Project number:** 2P30DA018310-21
- **Recipient organization:** UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN
- **Principal Investigator:** NEIL L KELLEHER
- **Activity code:** P30 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $309,481
- **Award type:** 2
- **Project period:** 2004-08-23 → 2029-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10934861

## Citation

> US National Institutes of Health, RePORTER application 10934861, Molecular Profiling & Characterization (2P30DA018310-21). Retrieved via AI Analytics 2026-06-01 from https://api.ai-analytics.org/grant/nih/10934861. Licensed CC0.

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