# Elucidating Protective Mechanisms for Cardiotoxicity of Kinase Inhibitors

> **NIH NIH P01** · STANFORD UNIVERSITY · 2024 · $626,062

## Abstract

ABSTRACT
Modern, molecularly targeted oncology therapeutics have revolutionized cancer treatment, prolonging cancer
survivorship. As patients’ lives are extended, cardiovascular toxicities caused by treatments have emerged as
a major clinical problem. This problem persists despite the development of advanced therapeutics, including
covalent tyrosine kinase inhibitors (KIs) that were expected to have reduced toxicity due to their increased
specificity.
Project 3 of this Program Project Grant (PPG) is focused at developing pharmacological strategies to protect the
heart from drug-induced cardiac toxicities. We will focus on ibrutinib as a paradigm because as a covalent,
irreversible inhibitor of the BTK receptor, it represents an important class of modern oncology drugs, and because
it is a first-line therapeutic for B-cell malignancies.
Our approach builds on our expertise in high throughput, automated assays of cardiac arrhythmia in hiPSC-
derived atrial and ventricular cardiomyocytes (hiPSC-aCMs and hiPSC-vCMs), and the use of deep learning
algorithms to recognize and quantify the incidences of arrhythmic waveforms in these cells. hiPSC-CMs treated
with ibrutinib exhibit arrhythmic waveforms consistent with presentations of atrial fibrillation and arrhythmia in
patients. Our pipeline to discover therapeutic strategies is based on identifying targets that block ibrutinib-
induced arrhythmia using hiPSC-aCMs and vCMs, and then testing candidates in a mouse model. We take two
orthogonal approaches to identify therapeutic targets. Specifically, we will delineate the regulatory elements in
chromatin (Aims 1 and 2) and key transcriptional inputs (Aim 3) that mediate the adverse effect of the drug on
cardiomyocytes. We will experimentally test each DNA element and each TF for the ability to block or exacerbate
ibrutinib-induced arrhythmia, thereby functionally defining genes and factors that are potential therapeutic targets
to revert the adverse effects of ibrutinib on the cardiomyocyte. Candidates suggested from preliminary data and
promising new targets emerging from these proposed studies will be evaluated for protective activity in a mouse
model of ibrutinib-induced cardiotoxicity.
Project 3 synergizes with Project 2 since some of the factors and chromatin elements that we will discover are
expected to coincide with eQTLs for drug susceptibility. Hence, our joint efforts will provide human genetic
evidence supporting protective loci with verified functional effects that can be targeted pharmacologically. Project
3 also synergizes with Project 1 by using its expertise in mouse models as well as its data on human
susceptibility loci. Key deliverables of Project 3 include identification of therapeutic targets and possibly
therapeutics to mitigate ibrutinib toxicity, as well as a discovery paradigm to improve the quality of life and
survivorship of cancer patients.

## Key facts

- **NIH application ID:** 10935741
- **Project number:** 2P01HL141084-06
- **Recipient organization:** STANFORD UNIVERSITY
- **Principal Investigator:** MARK MERCOLA
- **Activity code:** P01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $626,062
- **Award type:** 2
- **Project period:** 2019-09-01 → 2029-08-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/10935741

## Citation

> US National Institutes of Health, RePORTER application 10935741, Elucidating Protective Mechanisms for Cardiotoxicity of Kinase Inhibitors (2P01HL141084-06). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/10935741. Licensed CC0.

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