Heme and Nonheme Transition Metal Complexes, Reactivity, and Mechanism

NIH RePORTER · NIH · R35 · $228,705 · view on reporter.nih.gov ↗

Abstract

Project Summary This proposal focuses on the activation and utilization of dioxygen by heme and nonheme transition metal centers in metalloenzymes and in related synthetic systems. A subset of nonheme iron enzymes utilize a single iron center to activate dioxygen and mediate the oxidation of various substrates, including sulfur substrates as seen in thiol dioxygenases (TDOs) (e.g. cysteine dioxygenase (CDO)), persulfide dioxygenases (PDOs) (e.g. ethylmalonic encephalopathy protein (ETHE1)), sulfoxide synthases (e.g. EgtB, OvoA), and isopenicillin N synthase (IPNS). The related nonheme iron hydroxylases (e.g. TauD) and halogenases (e.g. SyrB2) also activate O2 with a single iron center to transform C-H bonds into C-X (X = OH, Cl) groups. Many questions remain regarding the mechanisms of action of these proteins, although the proposed pathways for these different enzymes include several common iron/oxygen intermediates. Heme enzymes also activate O2 for similar oxidative chemistry, such as C-H hydroxylation carried out by the monooxygenase cytochrome P450 (CYP), or the C-C bond cleavage and dioxygenation of indoles carried out by tryptophan and indoleamine dioxygenase (TDO/IDO). The proposed efforts involve the synthesis of biomimetic heme and nonheme iron complexes that will be used to examine how the first and second coordination spheres influence O2 activation and substrate oxidations. Efforts will be made to characterize metastable transition metal/O2 species (e.g. M-O2, M-OOH, M=O, M-OH) that are proposed as key intermediates in heme and nonheme O2 activation. Characterization of these species in structurally well-defined complexes will provide support for the analogous, putative intermediates in the enzymatic systems. The feasibility of key bond-making and bond-breaking events will be established by examining the reactivity of these metal/oxygen adducts with various substrates. Mechanistic questions will be addressed through comprehensive thermodynamic and kinetic studies. Systematic modifications will be made to these low molecular weight complexes through established synthetic methodologies, providing atomic-level control over their geometric/electronic structures. This approach provides a means to establish structure-function relationships that can be challenging or impossible to obtain when studying the enzymes alone. Questions to be addressed include what are the key intermediates during heme and nonheme iron activation of O2? What are the key spectroscopic features of these intermediates? Which of these species are capable of oxidizing which substrates? How does the structural and electronic properties of the ligands holding the metal center influence the O2 activation process? What controls the selectivity of substrate oxidations? Addressing these questions should lead to new knowledge regarding how heme and nonheme iron enzymes activate O2 and selectively oxidize substrates. These enzymes participate in biological processes that are e...

Key facts

NIH application ID
11037027
Project number
3R35GM149233-01S1
Recipient
JOHNS HOPKINS UNIVERSITY
Principal Investigator
David P Goldberg
Activity code
R35
Funding institute
NIH
Fiscal year
2024
Award amount
$228,705
Award type
3
Project period
2023-09-01 → 2028-08-31