BIOINFORMATICS SUPPORT FOR DNTP & DIR

NIH RePORTER · NIH · N01 · $450,000 · view on reporter.nih.gov ↗

Abstract

The Bioinformatics support contract provides bioinformatics support for Omics technologies. Examples of projects needing support for bioinformatic analysis include toxicogenomic analysis for 1) support for circulating cell free DNA (ccfDNA); 2) support for Mouse Aging study by providing dendogram and SNP analysis for 10 strains of mice; 3) support epigenomic analysis of DNA methylation changes in an in vitro model of cellular transformation; 4) analysis of 3D spheroids of HepaRG. Differential gene expression from TempO-Seq data performed with fold changes and pvalues; 5) support provided for analysis of microarray toxicogenomic data for placenta and liver; 6) support for analysis of AFFF (aqueous film-forming foams) for comparative analysis of toxicity after in vitro exposures in HTT assays.

Key facts

NIH application ID
11042022
Project number
75N96022C00005-P00003-9999-1
Recipient
SCIOME, LLC
Principal Investigator
RUCHIR SHAH
Activity code
N01
Funding institute
NIH
Fiscal year
2024
Award amount
$450,000
Award type
Project period
2022-09-24 → 2024-03-23