# Causal Genes at BMD Loci

> **NIH NIH R01** · UNIVERSITY OF WASHINGTON · 2024 · $58,752

## Abstract

PROJECT SUMMARY/ABSTRACT
 Osteoporosis is a common, chronic disease with an enormous health burden. There is an urgent need for
new anabolic therapies. The long-term goal of this project is to understand genetic risk factors for osteoporosis
to identify new drug targets to reduce this massive health burden. Genome wide association studies (GWAS)
have identified hundreds of loci associated with bone mineral density (BMD). However, the causal genes at these
loci remain to be discovered. The rationale for this project is that defining causal genes at BMD loci is, at present,
a phenotype-limited problem. More specifically, most causal genes reside in the genomic regions flanking BMD
loci. Thus, each locus implicates multiple candidate genes residing in these flanking regions. However, there are
100s of such candidate genes whose skeletal functions are unknown, and in vivo approaches with sufficient
throughput to fill this phenotype gap are virtually non-existent. There is an urgent scientific need to understand
the functions of genes at BMD loci, because they form the basis for understanding how genetic variants influence
BMD, and in turn, the ability to translate these loci into clinical targets. The objective of this project is to leverage
rapid-throughput biology in zebrafish to advance our understanding of genes at BMD loci that influence bone
mass and quality, and the mechanisms by which they act. Our central hypothesis is that genetic variants
influence BMD by regulating genes at BMD-associated loci, which work in concert to influence bone mass and
quality. In specific aim 1 (SA1), we will identify genes at BMD loci with adult loss-of-function skeletal phenotypes
in a reverse genetic screen. Our team has identified 56 BMD loci in a large-scale GWAS meta-analysis. A novel
phenotyping strategy will be employed to functionally annotate candidate genes residing within 80kb of these 56
BMD loci. Human genetic analyses will be performed to explore how each gene identified in our screen
contributes to BMD. In specific aim 2 (SA2), we will perform a multi-level examination to determine cellular and
molecular mechanisms by which genes at 7q31.31 influence bone mass and quality. SA2 will serve as a model
by which new genes discovered in SA1, and their interactions with each other, will be mechanistically evaluated.
This project is innovative because it substantially differs from the status quo for functional testing for causal
genes at BMD loci—the use of mouse phenotyping consortiums—and harnesses approaches developed by our
team to perform one of the most comprehensive functional analyses of genes at BMD loci to date. This project
is significant because it will: 1) establish an efficient model for exploration of human genomics underlying
osteoporosis-related traits, for which there is an urgent need; 2) identify new skeletal genes at BMD loci, a
genetic territory that is enriched with known osteoporosis drug targets, and which has proven to yield drug ...

## Key facts

- **NIH application ID:** 11073325
- **Project number:** 3R01AR074417-04S1
- **Recipient organization:** UNIVERSITY OF WASHINGTON
- **Principal Investigator:** Ronald Y Kwon
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $58,752
- **Award type:** 3
- **Project period:** 2020-05-15 → 2026-04-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/11073325

## Citation

> US National Institutes of Health, RePORTER application 11073325, Causal Genes at BMD Loci (3R01AR074417-04S1). Retrieved via AI Analytics 2026-05-26 from https://api.ai-analytics.org/grant/nih/11073325. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
