# Toward fast and deep imaging of living tissue with cellular resolution

> **NIH NIH R01** · CORNELL UNIVERSITY · 2024 · $62,190

## Abstract

Abstract
An exciting recent development for high spatial resolution deep tissue imaging is long wavelength three-
photon fluorescence microscopy (3PM). Since its first demonstration of imaging subcortical structures in the
mouse brain, 3PM has driven rapid progress in deep tissue imaging beyond the depth limit of two-photon
fluorescence microscopy (2PM). Long-wavelength 3PM is perhaps the most promising new technology for
deep imaging within scattering biological tissues, and has potential impacts in a large number of biomedical
fields such as neuroscience, immunology, and cancer biology. On the other hand, there are a number of
challenges that must be overcome before 3PM can reach its full potential. Because it is a higher-order
nonlinear process, three- photon excitation (3PE) is inherently weaker than two-photon excitation (2PE). The
weak signal strength of 3PM is particularly problematic for fast imaging of dynamic cellular process.
Furthermore, the laser sources for 3PM are not yet optimized for deep tissue penetration, and the complexity
and cost of the excitation source is a major barrier for the applications of 3PM in a typical biomedical research
lab. Finally, nearly all 3PM applications today are in the brains. Reaching anatomical frontiers is equally
possible in other organs with 3PM, but explicit demonstrations of intravital imaging in novel locations are
needed to bring deep imaging capability to other biological systems. The research activity of this proposal will
directly address the above challenges for in vivo deep tissue 3PM. We will develop a new generation of 3PM
that will improve the performance of existing 3PM by two orders of magnitude and enable multi-color deep
tissue imaging with a single excitation wavelength. We will demonstrate the unprecedented imaging
capabilities with a low-cost, fiber-based laser system, removing a key barrier for the deployment of 3PM in
biology labs. Furthermore, by applying our techniques to a wide variety of biological systems, we will create a
valuable knowledge base for the applications of 3PM. Our development of the next generation 3PM parallels
the development of 2PM, where the concerted development effort in lasers, microscopes, and biological
applications in the 1990s made 2PM ubiquitous in biomedical research labs by the early 2000s. Our vision is to
make deep, fast 3PM a routine instrument for a wide variety of biomedical applications just as 2PM does in the
shallower regions of biological tissues and organs. The successful completion of this program will enable
visualization of dynamic process at the sub-cellular level in intact organs and animal models that are
completely beyond the reach of any existing imaging techniques.

## Key facts

- **NIH application ID:** 11095369
- **Project number:** 3R01EB033179-03S1
- **Recipient organization:** CORNELL UNIVERSITY
- **Principal Investigator:** Nozomi Nishimura
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $62,190
- **Award type:** 3
- **Project period:** 2022-07-01 → 2025-03-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/11095369

## Citation

> US National Institutes of Health, RePORTER application 11095369, Toward fast and deep imaging of living tissue with cellular resolution (3R01EB033179-03S1). Retrieved via AI Analytics 2026-05-24 from https://api.ai-analytics.org/grant/nih/11095369. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
