# Dysregulation of tRNA: a new paradigm for cancer therapies

> **NIH NIH P20** · DARTMOUTH COLLEGE · 2024 · $262,400

## Abstract

tRNA activity can drive pathological processes in a codon-dependent manner, but these mechanisms have never been 
explored in the context of cancer vulnerability. Transfer RNAs (tRNAs) can regulate protein synthesis dynamics by 
determining translation velocity, shaping mRNA translation profiles. Thus, regulation of tRNA metabolism is critical for 
cellular homeostasis, and misregulation of tRNA modification pathways is associated with human diseases. For example, the 
tRNA methyltransferase complex METTL1-WDR4 catalyzes the N7-methylguanosine (m7G) modification of a tRNA subset 
and is dysregulated in human cancers. METTL1-WDR4-induced m7G tRNA methylation is essential to control tRNA folding 
and stability, which affects the translation of mRNAs harboring relevant cognate codons. Multiple lines of evidence show 
that METTL1, the catalytic subunit, functions as an oncogene through the stabilization and concomitant accumulation of 
tRNAs, showing that reprogramming of mRNA translation via changes in the tRNA pool can contribute to oncogenesis. For 
instance, the neuronal development associated tRNA isoform tRNA-Arg-TCT-4-1 possesses oncogenic characteristics and is 
highly elevated in multiple types of human cancer. On the other hand, failure to deposit m7G leads to the degradation of 
tRNAs that have been under-modified, as observed in the Rapid tRNA Decay pathway (RTD) in yeast. Despite the growing 
awareness of the importance of tRNA quality control in normal physiology, it is unclear whether an analogous RTD or other 
quality control pathways that govern tRNA function are altered in mammalian systems or cancer. Hence, the proposal goals 
are two-fold: 1) what are the mechanisms underlying the removal of m7G hypomodified tRNAs? and 2) Is the METTL1 
substrate tRNA-Arg-TCT-4-1 a potential cancer vulnerability? First, we aim to unveil the pathways and mechanisms that 
govern the quality control of tRNAs in cancer. To achieve this, we will measure changes in m7G-modified tRNA levels using 
Hybridization Chain Reaction RNA FISH and monitor translation efficiencies of fluorescent reporters enriched with m7G 
tRNA decoded codons after whole genome perturbations. Since lack of m7G modification leads to tRNA degradation, we 
hypothesize that knocking out quality control factors may rescue m7G tRNA levels. Secondly, we aim to test RNA-Arg-TCT- 
4-1 inhibition as a potential cancer therapeutic approach using sarcomas as a model. We will develop strategies to target and 
inhibit this novel oncogenic mediator, starting with antisense oligonucleotides. Mechanistically, we seek to understand how 
a single tRNA isoform can support malignant phenotypes and further understand how protein translation is dysregulated in 
sarcoma. Successful completion of the proposed work is expected to provide insight into the fundamental basis for 
understanding the role of m7G tRNA modification and its regulation in normal and malignant growth.

## Key facts

- **NIH application ID:** 11103412
- **Project number:** 5P20GM113132-09
- **Recipient organization:** DARTMOUTH COLLEGE
- **Principal Investigator:** Esteban Andres Orellana Vinueza
- **Activity code:** P20 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $262,400
- **Award type:** 5
- **Project period:** 2024-06-05 → 2026-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/11103412

## Citation

> US National Institutes of Health, RePORTER application 11103412, Dysregulation of tRNA: a new paradigm for cancer therapies (5P20GM113132-09). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/11103412. Licensed CC0.

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