# SBIR 136 - KITWARE:  Viime Extract: An AI-powered Knowledge Graph Extraction System for Metabolomics

> **NIH NIH N43** · KITWARE, INC. · 2024 · $299,999

## Abstract

Viime Extract is a web application for generating and curating knowledge graph data, focused on metabolomics and infectious disease use cases. Research papers and tabular data is fed into the system and analyzed with large language AI models (LLMs). The resultant JSON-LD data is matched against known ontologies (e.g. KEGG) and existing graph databases (e.g. Reactome). Extracted knowledge is also stored in a central graph database and presented to the user in an intuitive interactive visualization for validation and correction. In addition to providing a novel integrated, easy-to-use workflow, Viime Extract incorporates AI prompt and AI model selection tools to enable customization and optimization of automated results over time.

## Key facts

- **NIH application ID:** 11214910
- **Project number:** 75N93024C00035-0-9999-1
- **Recipient organization:** KITWARE, INC.
- **Principal Investigator:** JEFF BAUMES
- **Activity code:** N43 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2024
- **Award amount:** $299,999
- **Award type:** —
- **Project period:** 2024-09-06 → 2025-09-05

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/11214910

## Citation

> US National Institutes of Health, RePORTER application 11214910, SBIR 136 - KITWARE:  Viime Extract: An AI-powered Knowledge Graph Extraction System for Metabolomics (75N93024C00035-0-9999-1). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/11214910. Licensed CC0.

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